PASS2
  • Superfamily Details
  • Alignment & HMM

Superfamily Details

Superfamily summary
Superfamily Name:  GTF2I-like repeat
Class Name:  Alpha and beta proteins (a+b)
Fold Name:  GTF2I-like repeat
Number of Members:  1
Average Size: 
Members
SCOP ID Name Source
d1q60a- General transcription factor II-I Mouse (Mus musculus) [TaxId: 10090]

Alignment Based On Similarities In Structural Features using Comparer

                             10        20        30        40        50  
d1q60a-  (   1 )    gssgssglkqkvenlFnekCGealglkqavkvpfalFesfpedFyveglp
                          aaaaaaaaaaaaaaaaaa         aaaaaa    bbbb   

                             60        70        80        90        
d1q60a-  (  51 )    egvpfrrPstFgiprlekilrnkakikFiikkpemFetaikessgpssg
                                aaaaaaaaa     bbbb  333 aaaaaa       

solvent inaccessible: UPPER CASE X
solvent accesible: lower case x
alpha helix: red x
beta strand: blue x
3 - 10 helix: maroon x
hydrogen bond to main chain amide: bold x
hydrogen bond to mainchain carbonyl: underline x
disulphide bond: cedilla ç
positive phi: italic x