PASS2
  • Superfamily Details
  • Alignment & HMM

Superfamily Details

Superfamily summary
Superfamily Name:  DnaK suppressor protein DksA, alpha-hairpin domain
Class Name:  All alpha proteins
Fold Name:  Long alpha-hairpin
Number of Members:  1
Average Size: 
Members
SCOP ID Name Source
d1tjla1 DnaK suppressor protein DksA, alpha-hairpin domain Escherichia coli [TaxId: 562]

Alignment Based On Similarities In Structural Features using Comparer

                             10        20        30        40        50  
d1tjla1  (   7 )    rktsslsilaiAgvepyqekpgeeymneaqlahfrrileawrnqlrdevd
                          aaaaa                aaaaaaaaaaaaaaaaaaaaaaa

                             60        70        80        90        100 
d1tjla1  (  57 )    rtvthMqdeaanfpdpvdraaqeeefslelrnrdrerklikkIektlkkv
                    aaaaaaaaaaa    333aaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa

                        
d1tjla1  ( 107 )    eded
                    a   

solvent inaccessible: UPPER CASE X
solvent accesible: lower case x
alpha helix: red x
beta strand: blue x
3 - 10 helix: maroon x
hydrogen bond to main chain amide: bold x
hydrogen bond to mainchain carbonyl: underline x
disulphide bond: cedilla ç
positive phi: italic x