| SCOP Superfamily code | No of genomes | Pruned sequences | Total sequences | Superfamily name | |
|---|
| | | | |
| | | | |
| | | | |
| 46458 | 746 | 2440 | 3797 | Globin-like |
| 46548 | 161 | 401 | 523 | alpha-helical ferredoxin |
| 46557 | 77 | 112 | 208 | GreA transcript cleavage protein, N-terminal domain |
| 46561 | 116 | 143 | 190 | Ribosomal protein L29 (L29p) |
| 46565 | 194 | 485 | 1153 | Chaperone J-domain |
| 46575 | 6 | 7 | 16 | Theta subunit of DNA polymerase III |
| 46579 | 78 | 272 | 451 | Prefoldin |
| 46585 | 18 | 38 | 82 | Effector domain of the protein kinase pkn/prk1 |
| 46589 | 137 | 364 | 529 | tRNA-binding arm |
| 46596 | 65 | 122 | 230 | Eukaryotic DNA topoisomerase I, dispensable insert domain |
| 46600 | 97 | 184 | 233 | C-terminal UvrC-binding domain of UvrB |
| 46604 | 28 | 34 | 68 | Epsilon subunit of F1F0-ATP synthase C-terminal domain |
| 46609 | 366 | 531 | 1157 | Fe,Mn superoxide dismutase (SOD), N-terminal domain |
| 46626 | 305 | 855 | 1390 | Cytochrome c |
| 46689 | 564 | 3864 | 6653 | Homeodomain-like |
| 46767 | 113 | 196 | 402 | Methylated DNA-protein cysteine methyltransferase, C-terminal domain |
| 46774 | 19 | 78 | 191 | ARID-like |
| 46785 | 463 | 3298 | 4148 | "Winged helix" DNA-binding domain |
| 46894 | 193 | 1209 | 1817 | C-terminal effector domain of the bipartite response regulators |
| 46906 | 143 | 198 | 350 | Ribosomal protein L11, C-terminal domain |
| 46911 | 118 | 141 | 270 | Ribosomal protein S18 |
| 46915 | 87 | 97 | 137 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
| 46919 | 35 | 464 | 1258 | N-terminal Zn binding domain of HIV integrase |
| 46924 | 33 | 37 | 76 | RNA polymerase subunit RPB10 |
| 46929 | 19 | 20 | 40 | DNA helicase RuvA subunit, C-terminal domain |
| 46934 | 113 | 152 | 314 | UBA-like |
| 46938 | 26 | 149 | 226 | N-terminal domain of phosphatidylinositol transfer protein sec14p |
| 46942 | 17 | 53 | 81 | Elongation factor TFIIS domain 2 |
| 46946 | 163 | 198 | 366 | S13-like H2TH domain |
| 46950 | 35 | 40 | 74 | Hypothetical protein MTH1615 |
| 46955 | 168 | 443 | 578 | Putative DNA-binding domain |
| 46966 | 70 | 305 | 610 | Spectrin repeat |
| 46973 | 33 | 71 | 158 | Enzyme IIa from lactose specific PTS, IIa-lac |
| 46977 | 118 | 229 | 408 | Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain |
| 46984 | 6 | 11 | 42 | Smac/diablo |
| 46988 | 18 | 33 | 56 | Tubulin chaperone cofactor A |
| 46992 | 92 | 103 | 134 | Ribosomal protein S20 |
| 46997 | 17 | 40 | 76 | Bacterial immunoglobulin/albumin-binding domains |
| 47005 | 114 | 227 | 506 | Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex |
| 47014 | 8 | 15 | 24 | Protozoan pheromone proteins |
| 47027 | 46 | 104 | 247 | Acyl-CoA binding protein |
| 47031 | 37 | 149 | 464 | Second domain of FERM |
| 47040 | 9 | 16 | 50 | Kix domain of CBP (creb binding protein) |
| 47045 | 7 | 7 | 21 | alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 |
| 47050 | 14 | 41 | 141 | Thermostable subdomain from chicken villin headpiece |
| 47055 | 3 | 3 | 12 | TAF(II)230 TBP-binding fragment |
| 47060 | 169 | 446 | 1082 | S15/NS1 RNA-binding domain |
| 47072 | 2 | 4 | 11 | p8-MTCP1 |
| 47077 | 8 | 18 | 56 | T4 endonuclease V |
| 47082 | 32 | 43 | 85 | Fertilization protein |
| 47090 | 103 | 373 | 533 | PGBD-like |
| 47095 | 206 | 683 | 1557 | HMG-box |
| 47113 | 342 | 1228 | 2324 | Histone-fold |
| 47144 | 25 | 32 | 56 | HSC20 (HSCB), C-terminal oligomerisation domain |
| 47148 | 13 | 14 | 31 | Diol dehydratase, gamma subunit |
| 47152 | 12 | 19 | 37 | Methane monooxygenase hydrolase, gamma subunit |
| 47157 | 11 | 22 | 48 | Mitochondrial import receptor subunit Tom20 |
| 47162 | 55 | 129 | 240 | Apolipoprotein |
| 47170 | 11 | 24 | 58 | Aspartate receptor, ligand-binding domain |
| 47175 | 59 | 88 | 166 | Cytochromes |
| 47188 | 43 | 108 | 138 | Hemerythrin |
| 47195 | 30 | 88 | 210 | TMV-like viral coat proteins |
| 47203 | 86 | 427 | 770 | Acyl-CoA dehydrogenase C-terminal domain-like |
| 47212 | 12 | 14 | 66 | FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) |
| 47216 | 11 | 27 | 29 | Proteasome activator reg(alpha) |
| 47220 | 37 | 92 | 215 | alpha-catenin/vinculin |
| 47226 | 91 | 277 | 356 | Histidine-containing phosphotransfer domain, HPT domain |
| 47233 | 23 | 35 | 75 | Bacterial GAP domain |
| 47240 | 370 | 897 | 1364 | Ferritin-like |
| 47266 | 221 | 903 | 1534 | 4-helical cytokines |
| 47323 | 148 | 641 | 1063 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| 47336 | 215 | 534 | 830 | ACP-like |
| 47345 | 7 | 33 | 70 | Colicin E immunity proteins |
| 47353 | 63 | 913 | 2918 | Retrovirus capsid protein C-terminal domain |
| 47364 | 147 | 340 | 758 | Domain of the SRP/SRP receptor G-proteins |
| 47370 | 38 | 202 | 391 | Bromodomain |
| 47380 | 13 | 22 | 42 | ROP protein |
| 47384 | 119 | 420 | 528 | Homodimeric domain of signal transducing histidine kinase |
| 47391 | 18 | 33 | 79 | Dimerization-anchoring domain of cAMP-dependent type II PK regulatory subunit |
| 47396 | 15 | 34 | 58 | Transcription factor IIA (TFIIA), N-terminal domain |
| 47401 | 1 | 1 | 3 | Ectatomin, A & B chains |
| 47406 | 12 | 20 | 54 | SinR repressor dimerisation domain-like |
| 47413 | 191 | 834 | 1215 | lambda repressor-like DNA-binding domains |
| 47446 | 135 | 152 | 353 | Signal peptide-binding domain |
| 47454 | 11 | 25 | 97 | A DNA-binding domain in eukaryotic transcription factors |
| 47459 | 120 | 478 | 843 | Helix-loop-helix DNA-binding domain |
| 47473 | 313 | 1408 | 2385 | EF-hand |
| 47565 | 59 | 188 | 317 | Insect pheromon/odorant-binding proteins |
| 47571 | 8 | 10 | 30 | Cloroperoxidase |
| 47576 | 55 | 366 | 886 | Calponin-homology domain, CH-domain |
| 47587 | 24 | 38 | 124 | Domain of poly(ADP-ribose) polymerase |
| 47592 | 10 | 18 | 63 | MDM2 |
| 47598 | 25 | 34 | 53 | Met repressor-like |
| 47610 | 33 | 47 | 114 | Disulphide-bond formation facilitator (DSBA), insertion domain |
| 47616 | 219 | 934 | 1914 | Glutathione S-transferase (GST), C-terminal domain |
| 47644 | 71 | 135 | 224 | Methionine synthase domain |
| 47648 | 109 | 185 | 258 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
| 47655 | 30 | 93 | 216 | STAT |
| 47661 | 64 | 227 | 412 | t-snare proteins |
| 47668 | 8 | 19 | 73 | N-terminal domain of cbl (N-cbl) |
| 47672 | 15 | 32 | 81 | Transferrin receptor ectodomain, C-terminal domain |
| 47676 | 16 | 54 | 69 | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 |
| 47681 | 7 | 7 | 15 | C-terminal domain of B transposition protein |
| 47686 | 21 | 58 | 97 | Anaphylotoxins (complement system) |
| 47694 | 12 | 24 | 62 | Cytochrome c oxidase subunit h |
| 47699 | 112 | 433 | 605 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| 47719 | 35 | 48 | 152 | p53 tetramerization domain |
| 47724 | 24 | 30 | 52 | Domain of early E2A DNA-binding protein, ADDBP |
| 47729 | 136 | 284 | 557 | IHF-like DNA-binding proteins |
| 47741 | 82 | 215 | 466 | CO dehydrogenase ISP C-domain like |
| 47752 | 4 | 4 | 10 | Protein HNS-dependent expression A; HdeA |
| 47757 | 42 | 63 | 98 | Chemotaxis receptor methyltransferase CheR, N-terminal domain |
| 47762 | 13 | 41 | 114 | PAH2 domain |
| 47769 | 41 | 248 | 532 | SAM/Pointed domain |
| 47781 | 138 | 363 | 591 | RuvA domain 2-like |
| 47789 | 147 | 165 | 300 | C-terminal domain of RNA polymerase alpha subunit |
| 47794 | 122 | 206 | 323 | DNA repair protein Rad51, N-terminal domain |
| 47798 | 8 | 12 | 27 | Barrier-to-autointegration factor, BAF |
| 47802 | 41 | 55 | 173 | DNA polymerase beta, N-terminal domain-like |
| 47807 | 159 | 233 | 379 | 5' to 3' exonuclease, C-terminal subdomain |
| 47819 | 25 | 30 | 46 | HRDC-like |
| 47823 | 98 | 209 | 266 | lambda integrase-like, N-terminal domain |
| 47831 | 94 | 140 | 251 | Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain |
| 47836 | 137 | 1631 | 3073 | Retroviral matrix proteins |
| 47852 | 20 | 418 | 1000 | Hepatitis B viral capsid (hbcag) |
| 47857 | 100 | 228 | 363 | Apolipophorin-III |
| 47862 | 36 | 63 | 119 | Saposin |
| 47869 | 1 | 3 | 11 | Bacteriocin AS-48 |
| 47874 | 73 | 264 | 526 | Annexin |
| 47895 | 117 | 349 | 741 | Transducin (alpha subunit), insertion domain |
| 47912 | 26 | 78 | 138 | Wiscott-Aldrich syndrome protein, WASP, C-terminal domain |
| 47917 | 1497 | 1871 | 2813 | C-terminal domain of alpha and beta subunits of F1 ATP synthase |
| 47923 | 18 | 211 | 310 | Ypt/Rab-GAP domain of gyp1p |
| 47928 | 121 | 137 | 184 | N-terminal domain of the delta subunit of the F1F0-ATP synthase |
| 47933 | 19 | 24 | 43 | Endoplasmic reticulum protein ERP29, C-domain |
| 47938 | 12 | 16 | 25 | Functional domain of the splicing factor Prp18 |
| 47943 | 80 | 2142 | 3692 | Retrovirus capsid protein, N-terminal core domain |
| 47954 | 182 | 634 | 1223 | Cyclin-like |
| 47973 | 202 | 306 | 560 | Ribosomal protein S7 |
| 47979 | 64 | 96 | 179 | Iron-dependent represor protein, dimerization domain |
| 47986 | 67 | 276 | 657 | DEATH domain |
| 48008 | 10 | 10 | 34 | Fatty acid responsive transcription factor FadR, C-terminal domain |
| 48013 | 94 | 181 | 305 | Antitermination factor NusB |
| 48019 | 118 | 245 | 355 | DNA polymerase III clamp loader subunits, C-terminal domain |
| 48024 | 106 | 126 | 250 | N-terminal domain of DnaB helicase |
| 48029 | 50 | 58 | 123 | FliG |
| 48034 | 63 | 105 | 252 | Guanido kinase N-terminal domain |
| 48045 | 8 | 10 | 25 | Scaffolding protein gpD of bacteriophage procapsid |
| 48050 | 65 | 180 | 328 | Hemocyanin, N-terminal domain |
| 48056 | 130 | 303 | 534 | Di-copper centre-containing domain |
| 48065 | 27 | 215 | 558 | DBL homology domain (DH-domain) |
| 48076 | 14 | 17 | 46 | LigA subunit of an aromatic-ring-opening dioxygenase LigAB |
| 48081 | 55 | 235 | 396 | Methyl-coenzyme M reductase alpha and beta chain C-terminal domain |
| 48092 | 14 | 51 | 160 | Transcription factor STAT-4 N-domain |
| 48097 | 24 | 191 | 581 | Regulator of G-protein signalling, RGS |
| 48108 | 129 | 165 | 351 | Carbamoyl phosphate synthetase, large subunit connection domain |
| 48113 | 117 | 544 | 1309 | Heme-dependent peroxidases |
| 48140 | 46 | 85 | 180 | Ribosomal protein L19 (L19e) |
| 48145 | 12 | 142 | 537 | Influenza virus matrix protein M1 |
| 48150 | 116 | 316 | 702 | DNA-glycosylase |
| 48163 | 126 | 164 | 237 | An anticodon-binding domain of class I aminoacyl-tRNA synthetases |
| 48168 | 137 | 172 | 269 | R1 subunit of ribonucleotide reductase, N-terminal domain |
| 48173 | 94 | 185 | 370 | Cryptochrome/photolyase FAD-binding domain |
| 48179 | 267 | 799 | 1361 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| 48201 | 17 | 53 | 75 | Uteroglobin-like |
| 48208 | 182 | 567 | 878 | Six-hairpin glycosyltransferases |
| 48225 | 22 | 71 | 241 | Seven-hairpin glycosyltransferases |
| 48230 | 42 | 59 | 134 | Chondroitin AC/alginate lyase |
| 48239 | 161 | 487 | 788 | Terpenoid cylases/Protein prenyltransferases |
| 48256 | 178 | 275 | 659 | Citrate synthase |
| 48264 | 330 | 1725 | 2974 | Cytochrome P450 |
| 48283 | 96 | 353 | 444 | FIS-like |
| 48295 | 15 | 17 | 48 | TrpR-like |
| 48300 | 105 | 113 | 168 | Ribosomal protein L7/12, oligomerisation (N-terminal) domain |
| 48305 | 8 | 12 | 37 | MHC class II-associated invariant chain ectoplasmic trimerization domain |
| 48310 | 19 | 49 | 105 | Aldehyde ferredoxin oxidoreductase, C-terminal domains |
| 48317 | 109 | 245 | 339 | Acid phosphatase/Vanadium-dependent haloperoxidase |
| 48329 | 133 | 235 | 474 | RNA polymerase sigma subunit |
| 48334 | 113 | 229 | 467 | DNA repair protein MutS, domain III |
| 48340 | 73 | 246 | 447 | Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain |
| 48345 | 28 | 105 | 212 | A virus capsid protein alpha-helical domain |
| 48350 | 35 | 293 | 739 | GTPase activation domain, GAP |
| 48366 | 19 | 162 | 279 | Ras GEF |
| 48371 | 103 | 696 | 1183 | ARM repeat |
| 48403 | 121 | 810 | 1749 | Ankyrin repeat |
| 48425 | 21 | 89 | 247 | Sec7 domain |
| 48435 | 53 | 93 | 131 | Bacterial muramidases |
| 48439 | 62 | 295 | 425 | Protein prenylyltransferase |
| 48445 | 77 | 253 | 577 | 14-3-3 protein |
| 48452 | 121 | 605 | 805 | TPR-like |
| 48464 | 23 | 175 | 406 | ENTH/VHS domain |
| 48473 | 16 | 92 | 205 | Phosphoinositide-binding clathrin adaptor, N-terminal domain |
| 48479 | 12 | 14 | 47 | Cytochrome c oxidase subunit E |
| 48484 | 66 | 192 | 387 | Lipoxigenase |
| 48493 | 15 | 15 | 29 | gene 59 helicase assembly protein |
| 48498 | 37 | 67 | 120 | Tetracyclin repressor-like, C-terminal domain |
| 48503 | 28 | 96 | 202 | Skp1-Skp2 dimerisation domains |
| 48508 | 159 | 777 | 1812 | Nuclear receptor ligand-binding domain |
| 48537 | 43 | 71 | 162 | Phospholipase C/P1 nuclease |
| 48547 | 24 | 136 | 532 | Catalytic domain of cyclic nucleotide phosphodiesterase 4b2b |
| 48552 | 51 | 100 | 237 | Serum albumin-like |
| 48557 | 218 | 583 | 1143 | L-aspartase-like |
| 48576 | 244 | 649 | 1056 | Terpenoid synthases |
| 48592 | 379 | 729 | 1438 | GroEL equatorial domain-like chaperone equatorial domain |
| 48600 | 100 | 152 | 208 | Chorismate mutase II |
| 48608 | 5 | 15 | 47 | Peridinin-chlorophyll protein |
| 48613 | 65 | 105 | 188 | Heme oxygenase |
| 48619 | 124 | 440 | 780 | Phospholipase A2, PLA2 |
| 48647 | 14 | 40 | 80 | Fungal elicitin |
| 48652 | 13 | 19 | 35 | Tetraspanin |
| 48657 | 8 | 24 | 67 | Repressor of bacterial conjugation FinO |
| 48662 | 30 | 40 | 63 | Ribosomal protein L39e |
| 48666 | 9 | 11 | 22 | Methanol dehydrogenase subunit |
| 48670 | 17 | 68 | 139 | Transducin (heterotrimeric G protein), gamma chain |
| 48674 | 28 | 39 | 51 | Fe-only hydrogenase smaller subunit |
| 48678 | 36 | 71 | 148 | Moesin tail domain |
| 48682 | 6 | 12 | 32 | Nuclear receptor coactivator Src-1 |
| 48686 | 2 | 5 | 11 | Proteinase A inhibitor IA3 |
| 48690 | 15 | 20 | 43 | Epsilon subunit of mitochondrial F1F0-ATP synthase |
| 49265 | 115 | 720 | 1550 | Fibronectin type III |
| 49299 | 16 | 72 | 97 | PKD domain |
| 49303 | 76 | 144 | 349 | beta-Galactosidase/glucuronidase domain |
| 49309 | 30 | 64 | 145 | Transglutaminase, two C-terminal domains |
| 49313 | 36 | 361 | 882 | Cadherin |
| 49319 | 20 | 25 | 51 | Actinoxanthin-like |
| 49329 | 216 | 348 | 743 | Cu,Zn superoxide dismutase-like |
| 49344 | 24 | 31 | 81 | CBD9-like |
| 49348 | 11 | 32 | 106 | Clathrin adaptor appendage domain |
| 49354 | 57 | 300 | 607 | PapD-like |
| 49363 | 24 | 63 | 106 | Purple acid phosphatase, N-terminal domain |
| 49367 | 21 | 23 | 51 | Superoxide reductase-like |
| 49373 | 50 | 125 | 264 | Invasin/intimin cell-adhesion fragments |
| 49380 | 5 | 5 | 20 | Diphtheria toxin, C-terminal domain |
| 49384 | 122 | 303 | 458 | Carbohydrate-binding domain |
| 49401 | 43 | 251 | 380 | Bacterial adhesins |
| 49410 | 33 | 115 | 199 | Alpha-macroglobulin receptor domain |
| 49417 | 109 | 486 | 1389 | p53-like transcription factors |
| 49441 | 50 | 55 | 123 | Cytochrome f, large domain |
| 49447 | 26 | 93 | 206 | Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor |
| 49452 | 78 | 118 | 248 | Starch-binding domain |
| 49464 | 39 | 101 | 186 | Carboxypeptidase D, a regulatory domain |
| 49468 | 6 | 7 | 21 | VHL |
| 49472 | 48 | 66 | 150 | Transthyretin (prealbumin) |
| 49478 | 14 | 21 | 51 | B repeat unit of collagen binding surface protein (cna) |
| 49482 | 63 | 159 | 334 | Aromatic compound dioxygenase |
| 49493 | 150 | 256 | 376 | HSP40/DnaJ peptide-binding domain |
| 49498 | 11 | 11 | 21 | alpha-Amylase inhibitor tendamistat |
| 49503 | 1802 | 2733 | 4453 | Cupredoxins |
| 49562 | 74 | 530 | 1229 | C2 domain (Calcium/lipid-binding domain, CaLB) |
| 49584 | 23 | 124 | 203 | Periplasmic chaperone C-domain |
| 49590 | 42 | 195 | 292 | PHL pollen allergen |
| 49594 | 4 | 6 | 14 | Rab geranylgeranyltransferase alpha-subunit, insert domain |
| 49599 | 25 | 233 | 388 | TRAF domain-like |
| 49606 | 51 | 103 | 215 | Neurophysin II |
| 49611 | 301 | 1700 | 3264 | Viral coat and capsid proteins |
| 49695 | 65 | 225 | 471 | gamma-Crystallin-like |
| 49723 | 77 | 250 | 504 | Lipase/lipooxygenase domain (PLAT/LH2 domain) |
| 49742 | 24 | 62 | 143 | PHM/PNGase F |
| 49749 | 51 | 196 | 382 | Viral proteins |
| 49758 | 29 | 96 | 284 | Calpain large subunit, middle domain (domain III) |
| 49764 | 179 | 448 | 671 | HSP20-like chaperones |
| 49772 | 12 | 20 | 49 | Ecotin, trypsin inhibitor |
| 49777 | 91 | 179 | 333 | PEBP-like |
| 49785 | 208 | 788 | 1354 | Galactose-binding domain-like |
| 49818 | 82 | 1609 | 2964 | Viral protein domain |
| 49830 | 39 | 214 | 455 | F-MuLV receptor-binding domain |
| 49835 | 38 | 81 | 156 | Virus attachment protein |
| 49842 | 80 | 282 | 650 | TNF-like |
| 49854 | 29 | 185 | 306 | Spermadhesin, CUB domain |
| 49863 | 8 | 8 | 38 | Hyaluronate lyase-like, C-terminal domain |
| 49870 | 60 | 164 | 477 | Osmotin, thaumatin-like protein |
| 49879 | 71 | 300 | 527 | SMAD/FHA domain |
| 49889 | 15 | 23 | 60 | Soluble secreted chemokine inhibitor, VCCI |
| 49894 | 6 | 11 | 38 | Paculovirus p35 |
| 49899 | 370 | 1443 | 2261 | Concanavalin A-like lectins/glucanases |
| 49994 | 28 | 38 | 150 | beta-Galactosidase, domain 5 |
| 49998 | 28 | 67 | 202 | Copper amine oxidase, domain 3 (catalytic) |
| 50005 | 17 | 26 | 102 | Hyaluronate lyase-like, central domain |
| 50012 | 5 | 6 | 29 | EV matrix protein |
| 50017 | 3 | 5 | 20 | gp9 |
| 50022 | 193 | 526 | 886 | ISP domain |
| 50037 | 33 | 49 | 95 | C-terminal domain of transcriptional repressors |
| 50044 | 89 | 795 | 2052 | SH3-domain |
| 50084 | 48 | 132 | 409 | Myosin S1 fragment, N-terminal domain |
| 50090 | 53 | 89 | 108 | Electron transport accessory proteins |
| 50104 | 235 | 694 | 934 | Translation proteins SH3-like domain |
| 50118 | 10 | 13 | 44 | Cell growth inhibitor/plasmid maintainance toxic component |
| 50122 | 43 | 324 | 1133 | DNA-binding domain of retroviral integrase |
| 50129 | 372 | 1035 | 1630 | GroES-like |
| 50151 | 28 | 52 | 99 | SacY-like RNA-binding domain |
| 50156 | 121 | 643 | 1638 | PDZ domain-like |
| 50176 | 15 | 17 | 217 | N-terminal domains of the minor coat protein g3p |
| 50182 | 56 | 266 | 492 | Sm-like ribonucleoproteins |
| 50193 | 180 | 221 | 442 | Ribosomal protein L14 |
| 50199 | 69 | 154 | 239 | Staphylococcal nuclease |
| 50203 | 58 | 208 | 475 | Bacterial enterotoxins |
| 50242 | 26 | 81 | 210 | TIMP-like |
| 50249 | 478 | 3109 | 3708 | Nucleic acid-binding proteins |
| 50324 | 113 | 180 | 328 | Inorganic pyrophosphatase |
| 50331 | 100 | 355 | 467 | MOP-like |
| 50341 | 71 | 253 | 402 | CheW-like |
| 50346 | 20 | 35 | 67 | Photosynthetic reaction centre, H-chain, cytoplasmic domain |
| 50353 | 81 | 319 | 689 | Cytokine |
| 50370 | 63 | 223 | 391 | Ricin B-like lectins |
| 50382 | 3 | 4 | 24 | Agglutinin |
| 50386 | 87 | 225 | 373 | STI-like |
| 50405 | 39 | 83 | 184 | Actin-crosslinking proteins |
| 50443 | 7 | 8 | 29 | L-fucose isomerase, C-terminal domain |
| 50447 | 1676 | 2187 | 3721 | Translation proteins |
| 50465 | 1302 | 1501 | 2403 | EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain |
| 50475 | 120 | 325 | 410 | FMN-binding split barrel |
| 50486 | 122 | 206 | 298 | FMT C-terminal domain-like |
| 50494 | 377 | 2451 | 4632 | Trypsin-like serine proteases |
| 50610 | 4 | 4 | 15 | mu transposase, C-terminal domain |
| 50615 | 1324 | 1705 | 2442 | N-terminal domain of alpha and beta subunits of F1 ATP synthase |
| 50621 | 158 | 357 | 516 | Alanine racemase-like, C-terminal domain |
| 50630 | 136 | 581 | 1119 | Acid proteases |
| 50677 | 137 | 348 | 699 | ValRS/IleRS/LeuRS editing domain |
| 50685 | 38 | 72 | 146 | Barwin-like endoglucanases |
| 50692 | 128 | 349 | 671 | ADC-like |
| 50715 | 111 | 172 | 275 | Ribosomal protein L25-like |
| 50723 | 6 | 10 | 44 | Core binding factor beta, CBF |
| 50729 | 87 | 911 | 1928 | PH domain-like |
| 50784 | 14 | 33 | 76 | Transcription factor IIA (TFIIA), N-terminal domain |
| 50789 | 43 | 60 | 164 | Herpes virus serine proteinase, assemblin |
| 50800 | 166 | 307 | 527 | PK beta-barrel domain-like |
| 50809 | 5 | 7 | 37 | XRCC4, N-terminal domain |
| 50814 | 160 | 608 | 1132 | Lipocalins |
| 50876 | 13 | 33 | 103 | Avidin/streptavidin |
| 50882 | 11 | 17 | 35 | Metalloprotease inhibitor |
| 50886 | 6 | 7 | 20 | D-aminopeptidase, middle and C-terminal domains |
| 50891 | 183 | 540 | 1101 | Cyclophilin (peptidylprolyl isomerase) |
| 50904 | 5 | 18 | 32 | Oncogene products |
| 50911 | 24 | 50 | 112 | Mannose 6-phosphate receptor domain |
| 50916 | 16 | 24 | 61 | Rap30/74 interaction domains |
| 50923 | 46 | 199 | 496 | Hemopexin-like domain |
| 50934 | 1 | 2 | 15 | Tachylectin-2 |
| 50939 | 99 | 684 | 1461 | Sialidases (neuraminidases) |
| 50952 | 56 | 212 | 274 | Soluble quinoprotein glucose dehydrogenase |
| 50956 | 12 | 18 | 55 | Thermostable phytase (3-phytase) |
| 50960 | 93 | 261 | 362 | TolB, C-terminal domain |
| 50965 | 29 | 179 | 269 | Galactose oxidase, central domain |
| 50969 | 65 | 272 | 453 | YVTN repeat-like/Quinoprotein amine dehydrogenase |
| 50974 | 21 | 64 | 189 | Nitrous oxide reductase, N-terminal domain |
| 50978 | 82 | 428 | 912 | WD40-repeat |
| 50985 | 42 | 189 | 317 | RCC1/BLIP-II |
| 50989 | 15 | 20 | 65 | Clathrin heavy-chain terminal domain |
| 50993 | 60 | 230 | 304 | Prolyl oligopeptidase, N-terminal domain |
| 50998 | 71 | 280 | 559 | Quinoprotein alcohol dehydrogenase-like |
| 51004 | 80 | 271 | 443 | C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase |
| 51011 | 255 | 541 | 1030 | alpha-Amylases, C-terminal beta-sheet domain |
| 51045 | 31 | 207 | 658 | WW domain |
| 51055 | 53 | 98 | 146 | Carbohydrate binding domain |
| 51064 | 128 | 156 | 256 | Head domain of nucleotide exchange factor GrpE |
| 51069 | 67 | 231 | 607 | Carbonic anhydrase |
| 51081 | 9 | 33 | 78 | Bacteriochlorophyll A protein |
| 51087 | 33 | 158 | 405 | Outer surface protein A |
| 51092 | 5 | 20 | 36 | Vitelline membrane outer protein-I (VMO-I) |
| 51096 | 13 | 110 | 306 | delta-Endotoxin (insectocide), middle domain |
| 51101 | 27 | 129 | 239 | Mannose-binding lectins |
| 51110 | 65 | 210 | 279 | alpha-D-mannose-specific plant lectins |
| 51120 | 58 | 221 | 312 | Serralysin-like metalloprotease, C-terminal domain |
| 51126 | 236 | 975 | 1311 | Pectin lyase-like |
| 51156 | 18 | 40 | 85 | Insect cysteine-rich antifreeze protein |
| 51161 | 162 | 555 | 923 | Trimeric LpxA-like enzymes |
| 51177 | 2 | 12 | 29 | An insect antifreeze protein |
| 51182 | 241 | 638 | 840 | RmlC-like cupins |
| 51197 | 129 | 371 | 639 | Clavaminate synthase-like |
| 51206 | 145 | 359 | 638 | cAMP-binding domain-like |
| 51215 | 8 | 9 | 26 | Regulatory protein AraC |
| 51219 | 6 | 6 | 12 | Trp RNA-binding attenuation protein (TRAP) |
| 51225 | 31 | 68 | 119 | Fibre shaft of virus attachment proteins |
| 51230 | 195 | 745 | 1555 | Single hybrid motif |
| 51246 | 204 | 593 | 927 | Rudiment single hybrid motif |
| 51261 | 63 | 147 | 323 | Duplicated hybrid motif |
| 51269 | 10 | 66 | 115 | Type III antifreeze protein |
| 51274 | 7 | 10 | 23 | Head decoration protein D (gpD, major capsid protein D) |
| 51278 | 77 | 107 | 299 | Urease, beta-subunit |
| 51283 | 143 | 249 | 511 | Deoxyuridine 5'-triphosphate nucleotidohydrolase (dUTPase) |
| 51289 | 14 | 16 | 36 | ACMNPV telokin-like protein |
| 51294 | 96 | 220 | 307 | Hedgehog/intein (Hint) domain |
| 51306 | 158 | 459 | 644 | LexA/Signal peptidase |
| 51316 | 40 | 76 | 142 | Mss4-like |
| 51322 | 8 | 11 | 25 | Cyanovirin-N |
| 51327 | 10 | 10 | 18 | Head-binding domain of phage P22 tailspike protein |
| 51332 | 112 | 130 | 298 | E2 regulatory, transactivation domain |
| 51338 | 113 | 246 | 493 | Composite domain of metallo-dependent hydrolases |
| 51344 | 251 | 277 | 398 | Epsilon subunit of F1F0-ATP synthase N-terminal domain |
| 51351 | 203 | 375 | 713 | Triosephosphate isomerase (TIM) |
| 51366 | 262 | 1321 | 2078 | Ribulose-phoshate binding barrel |
| 51391 | 117 | 269 | 358 | Thiamin phosphate synthase |
| 51395 | 197 | 808 | 1171 | FMN-linked oxidoreductases |
| 51412 | 139 | 321 | 570 | Inosine monophosphate dehydrogenase (IMPDH) |
| 51419 | 178 | 468 | 774 | PLP-binding barrel |
| 51430 | 187 | 690 | 1342 | NAD(P)-linked oxidoreductase |
| 51445 | 549 | 1930 | 3217 | (Trans)glycosidases |
| 51556 | 184 | 685 | 919 | Metallo-dependent hydrolases |
| 51569 | 309 | 1651 | 2437 | Aldolase |
| 51604 | 249 | 551 | 1165 | Enolase C-terminal domain-like |
| 51621 | 213 | 479 | 739 | Phosphoenolpyruvate/pyruvate domain |
| 51645 | 77 | 90 | 185 | Malate synthase G |
| 51649 | 6873 | 7595 | 9207 | RuBisCo, C-terminal domain |
| 51658 | 147 | 349 | 555 | Xylose isomerase-like |
| 51679 | 108 | 326 | 453 | Bacterial luciferase-like |
| 51690 | 113 | 218 | 371 | Quinolinic acid phosphoribosyltransferase, C-terminal domain |
| 51695 | 57 | 202 | 476 | Phosphatidylinositol-specific phospholipase C (PI-PLC) |
| 51703 | 58 | 108 | 285 | Cobalamin (vitamin B12)-dependent enzymes |
| 51713 | 107 | 137 | 277 | tRNA-guanine transglycosylase |
| 51717 | 141 | 293 | 534 | Dihydropteroate synthetase-like |
| 51726 | 125 | 244 | 396 | Uroporphyrinogen decarboxylase, UROD |
| 51730 | 99 | 127 | 235 | FAD-linked oxidoreductase |
| 51735 | 906 | 5360 | 8213 | NAD(P)-binding Rossmann-fold domains |
| 51971 | 239 | 958 | 1349 | Nucleotide-binding domain |
| 51984 | 114 | 221 | 286 | MurCD N-terminal domain |
| 51989 | 39 | 60 | 157 | Cellulases |
| 51998 | 180 | 332 | 531 | PFL-like glycyl radical enzymes |
| 52009 | 139 | 252 | 467 | Phosphohistidine domain |
| 52016 | 117 | 214 | 346 | Aconitase |
| 52021 | 141 | 184 | 417 | Carbamoyl phosphate synthetase, small subunit N-terminal domain |
| 52025 | 48 | 140 | 234 | Transferrin receptor ectodomain, apical domain |
| 52029 | 408 | 738 | 1438 | GroEL apical domain-like |
| 52038 | 21 | 29 | 50 | Barstar (barnase inhibitor) |
| 52042 | 49 | 78 | 117 | Ribosomal protein L32e |
| 52047 | 41 | 310 | 469 | RNI-like |
| 52058 | 167 | 911 | 1337 | L domain-like |
| 52075 | 43 | 235 | 305 | Outer arm dynein light chain 1 |
| 52080 | 164 | 297 | 383 | Ribosomal proteins L15p and L18e |
| 52087 | 26 | 182 | 290 | C-terminal domain of phosphatidylinositol transfer protein sec14p |
| 52091 | 87 | 250 | 299 | Anti-sigma factor antagonist SpoIIaa |
| 52096 | 310 | 906 | 1381 | ClpP/crotonase |
| 52113 | 125 | 243 | 382 | BRCT domain |
| 52121 | 195 | 305 | 624 | Lumazine synthase |
| 52129 | 45 | 225 | 451 | Caspase-like |
| 52141 | 174 | 294 | 496 | DNA glycosylase |
| 52151 | 127 | 317 | 600 | FabD/lysophospholipase-like |
| 52156 | 131 | 163 | 271 | Initiation factor IF2/eIF5b, domain 3 |
| 52161 | 140 | 179 | 254 | Ribosomal protein L13 |
| 52166 | 146 | 205 | 335 | Ribosomal protein L4 |
| 52172 | 328 | 3715 | 5432 | CheY-like |
| 52200 | 28 | 199 | 325 | Toll/Interleukin receptor TIR domain |
| 52206 | 4 | 4 | 10 | Hypothetical protein MTH538 |
| 52210 | 112 | 338 | 689 | Succinyl-CoA synthetase domains |
| 52218 | 196 | 615 | 1012 | Flavoproteins |
| 52242 | 108 | 261 | 504 | Cobalamin (vitamin B12)-binding domain |
| 52251 | 8 | 12 | 25 | Ornithine decarboxylase N-terminal "wing" domain |
| 52255 | 118 | 161 | 317 | N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) mutase PurE |
| 52259 | 29 | 59 | 142 | Cutinase-like |
| 52266 | 119 | 338 | 497 | Esterase/acetylhydrolase |
| 52279 | 94 | 180 | 239 | Beta-D-glucan exohydrolase, C-terminal domain |
| 52283 | 197 | 619 | 933 | Formate/glycerate dehydrogenase catalytic domain-like |
| 52304 | 68 | 83 | 187 | Type II 3-dehydroquinate dehydratase |
| 52309 | 30 | 39 | 47 | Nucleoside 2-deoxyribosyltransferase |
| 52313 | 231 | 258 | 510 | Ribosomal protein S2 |
| 52317 | 192 | 898 | 1587 | Class I glutamine amidotransferase-like |
| 52335 | 124 | 281 | 562 | Methylglyoxal synthase-like |
| 52343 | 287 | 773 | 1549 | Ferredoxin reductase-like, C-terminal NADP-linked domain |
| 52374 | 181 | 1411 | 2594 | Nucleotidylyl transferase |
| 52402 | 171 | 623 | 1035 | Adenine nucleotide alpha hydrolases-like |
| 52413 | 23 | 39 | 105 | UDP-glucose dehydrogenase (UDPGDH), C-terminal (UDP-binding) domain |
| 52418 | 115 | 203 | 294 | Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain |
| 52425 | 97 | 168 | 301 | Cryptochrome/photolyase, N-terminal domain |
| 52431 | 137 | 563 | 832 | ETFP adenine nucleotide-binding domain-like |
| 52440 | 216 | 812 | 1589 | PreATP-grasp domain |
| 52467 | 217 | 775 | 1391 | DHS-like NAD/FAD-binding domain |
| 52490 | 534 | 1087 | 1910 | Tubulin, GTPase domain |
| 52499 | 105 | 269 | 365 | Cysteine hydrolase |
| 52507 | 118 | 238 | 392 | DFP DNA/pantothenate metabolism flavoprotein |
| 52512 | 98 | 223 | 315 | Phosphosugar isomerase |
| 52518 | 262 | 1201 | 1857 | Thiamin diphosphate-binding fold (THDP-binding) |
| 52540 | 2158 | 10101 | 14975 | P-loop containing nucleotide triphosphate hydrolases |
| 52728 | 32 | 73 | 155 | Fructose permease, subunit IIb |
| 52733 | 68 | 76 | 139 | Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT) |
| 52738 | 60 | 134 | 270 | Methylesterase CheB, C-terminal domain |
| 52743 | 165 | 449 | 859 | Subtilisin-like |
| 52768 | 128 | 390 | 569 | Arginase/deacetylase |
| 52777 | 147 | 353 | 750 | CoA-dependent acyltransferases |
| 52788 | 100 | 216 | 399 | Phosphotyrosine protein phosphatases I |
| 52794 | 33 | 78 | 148 | Enzyme IIB-cellobiose |
| 52799 | 88 | 642 | 1704 | (Phosphotyrosine protein) phosphatases II |
| 52821 | 131 | 457 | 723 | Rhodanese/Cell cycle control phosphatase |
| 52833 | 440 | 2719 | 3926 | Thioredoxin-like |
| 52913 | 5 | 6 | 28 | RNA 3'-terminal phosphate cyclase, RPTC, insert domain |
| 52922 | 163 | 412 | 636 | TK C-terminal domain-like |
| 52935 | 142 | 228 | 483 | Pyruvate kinase, C-terminal domain |
| 52943 | 143 | 219 | 414 | ATP syntase (F1-ATPase), gamma subunit |
| 52949 | 68 | 90 | 144 | Leucine aminopeptidase (Aminopeptidase A), N-terminal domain |
| 52954 | 134 | 400 | 804 | Anticodon-binding domain of Class II aaRS |
| 52964 | 36 | 40 | 72 | TolB, N-terminal domain |
| 52968 | 11 | 13 | 40 | B12-dependend dehydatases associated subunit |
| 52972 | 113 | 248 | 425 | Maf/Ham1 |
| 53032 | 31 | 44 | 82 | tRNA splicing endonuclease, C-terminal domain |
| 53036 | 14 | 25 | 49 | Eukaryotic RPB5 N-terminal domain |
| 53041 | 169 | 261 | 495 | Resolvase-like |
| 53056 | 104 | 192 | 358 | beta-carbonic anhydrase, cab |
| 53062 | 58 | 139 | 214 | IIA domain of mannose transporter, IIA-Man |
| 53067 | 570 | 1696 | 3154 | Actin-like ATPase domain |
| 53092 | 127 | 272 | 358 | Creatinase/prolidase N-terminal domain |
| 53098 | 227 | 511 | 744 | Ribonuclease H-like |
| 53137 | 214 | 494 | 762 | Translational machinery components |
| 53146 | 57 | 143 | 168 | MTH1175-like |
| 53150 | 90 | 105 | 216 | DNA repair protein MutS, domain II |
| 53155 | 34 | 37 | 72 | Methylated DNA-protein cysteine methyltransferase domain |
| 53163 | 65 | 106 | 150 | HybD-like |
| 53167 | 122 | 302 | 630 | Purine and uridine phosphorylases |
| 53178 | 97 | 112 | 255 | Peptidyl-tRNA hydrolase |
| 53182 | 39 | 56 | 136 | Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase) |
| 53187 | 172 | 796 | 1283 | Zn-dependent exopeptidases |
| 53213 | 82 | 136 | 160 | LigB subunit of an aromatic-ring-opening dioxygenase LigAB |
| 53218 | 106 | 310 | 529 | Molybdenum cofactor biosynthesis proteins |
| 53223 | 207 | 436 | 918 | Aminoacid dehydrogenase-like, N-terminal domain |
| 53244 | 106 | 457 | 752 | MurD-like peptide ligases, peptide-binding domain |
| 53254 | 139 | 439 | 905 | Phosphoglycerate mutase-like |
| 53271 | 232 | 894 | 1510 | PRTase-like |
| 53300 | 205 | 383 | 1030 | vWA-like |
| 53316 | 89 | 311 | 379 | CoA transferase |
| 53323 | 82 | 193 | 278 | Pyruvate-ferredoxin oxidoreductase, PFOR, domain III |
| 53328 | 122 | 308 | 638 | Formyltransferase |
| 53335 | 319 | 1812 | 2983 | S-adenosyl-L-methionine-dependent methyltransferases |
| 53383 | 645 | 3259 | 5916 | PLP-dependent transferases |
| 53448 | 242 | 1207 | 1990 | Nucleotide-diphospho-sugar transferases |
| 53474 | 453 | 2333 | 4107 | alpha/beta-Hydrolases |
| 53590 | 58 | 109 | 233 | Nucleoside hydrolase |
| 53597 | 170 | 348 | 737 | Dihydrofolate reductases |
| 53613 | 136 | 566 | 763 | Ribokinase-like |
| 53623 | 117 | 479 | 881 | MurD-like peptide ligases, catalytic domain |
| 53633 | 113 | 225 | 345 | Carbamate kinase-like |
| 53639 | 97 | 203 | 368 | AraD-like aldolase/epimerase |
| 53644 | 19 | 40 | 79 | Cytosolic phospholipase A2 catalytic |
| 53649 | 156 | 515 | 808 | Alkaline phosphatase-like |
| 53659 | 171 | 395 | 806 | Isocitrate/Isopropylmalate dehydrogenases |
| 53671 | 185 | 364 | 737 | Aspartate/ornithine carbamoyltransferase |
| 53681 | 102 | 184 | 307 | Aspartate/glutamate racemase |
| 53686 | 186 | 671 | 1320 | Tryptophan synthase beta subunit-like PLP-dependent enzymes |
| 53697 | 227 | 596 | 997 | SIS domain |
| 53706 | 99 | 295 | 630 | Formate dehydrogenase/DMSO reductase, domains 1-3 |
| 53720 | 253 | 1178 | 1967 | ALDH-like |
| 53732 | 112 | 235 | 326 | Aconitase iron-sulfur domain |
| 53738 | 147 | 376 | 813 | Phosphoglucomutase, first 3 domains |
| 53743 | 17 | 19 | 40 | L-fucose isomerase, N-terminal and second domains |
| 53748 | 177 | 277 | 553 | Phosphoglycerate kinase |
| 53756 | 134 | 574 | 790 | UDP-Glycosyltransferase/glycogen phosphorylase |
| 53774 | 88 | 126 | 225 | Glutaminase/Asparaginase |
| 53784 | 122 | 211 | 392 | Phosphofructokinase |
| 53790 | 117 | 253 | 427 | Cobalt precorrin-4 methyltransferase CbiF |
| 53795 | 222 | 309 | 595 | PEP carboxykinase-like |
| 53800 | 114 | 193 | 365 | Chelatase |
| 53807 | 219 | 789 | 1189 | "Helical backbone" metal receptor |
| 53822 | 153 | 937 | 1789 | Periplasmic binding protein-like I |
| 53850 | 264 | 1518 | 2395 | Periplasmic binding protein-like II |
| 53901 | 415 | 1441 | 2717 | Thiolase-like |
| 53920 | 42 | 75 | 164 | Fe-only hydrogenase |
| 53927 | 71 | 102 | 147 | Cytidine deaminase-like |
| 53933 | 58 | 122 | 304 | Microbial ribonucleases |
| 53955 | 315 | 1013 | 1660 | Lysozyme-like |
| 54001 | 237 | 816 | 1597 | Cysteine proteinases |
| 54060 | 69 | 148 | 233 | His-Me finger endonucleases |
| 54076 | 121 | 354 | 749 | RNase A-like |
| 54098 | 96 | 124 | 370 | Prion-like |
| 54106 | 96 | 214 | 267 | LysM domain |
| 54111 | 77 | 100 | 249 | Urease, gamma-subunit |
| 54117 | 53 | 293 | 664 | Interleukin 8-like chemokines |
| 54160 | 48 | 197 | 339 | Chromo domain-like |
| 54171 | 41 | 290 | 564 | DNA-binding domain |
| 54184 | 49 | 87 | 193 | Penicillin-binding protein 2x (pbp-2x), c-terminal domain |
| 54189 | 166 | 326 | 421 | Ribosomal proteins L23 and L15e |
| 54197 | 140 | 299 | 426 | HIT-like |
| 54211 | 573 | 1842 | 2789 | Ribosomal protein S5 domain 2-like |
| 54236 | 176 | 743 | 1408 | Ubiquitin-like |
| 54277 | 14 | 39 | 107 | CAD & PB1 domains |
| 54285 | 96 | 183 | 236 | MoaD/ThiS |
| 54292 | 339 | 982 | 1559 | 2Fe-2S ferredoxin-like |
| 54328 | 24 | 60 | 122 | Staphylokinase/streptokinase |
| 54334 | 40 | 153 | 386 | Superantigen toxins, C-terminal domain |
| 54358 | 20 | 44 | 88 | Immunoglobulin-binding domains |
| 54364 | 94 | 119 | 265 | Translation initiation factor IF3, N-terminal domain |
| 54368 | 180 | 245 | 453 | Glutamine synthetase, N-terminal domain |
| 54373 | 178 | 525 | 842 | FAD-linked reductases, C-terminal domain |
| 54403 | 93 | 269 | 484 | Cystatin/monellin |
| 54416 | 34 | 66 | 156 | Copper amine oxidase, domains 1 and 2 |
| 54423 | 17 | 19 | 35 | Disulfide bond isomerase, DsbC, N-terminal domain |
| 54427 | 137 | 459 | 644 | NTF2-like |
| 54441 | 4 | 4 | 21 | Uracil-DNA glycosylase inhibitor protein |
| 54447 | 11 | 18 | 36 | ssDNA-binding transcriptional regulator domain |
| 54452 | 186 | 2391 | 4185 | MHC antigen-recognition domain |
| 54495 | 74 | 427 | 957 | UBC-like |
| 54506 | 98 | 215 | 328 | Diaminopimelate epimerase |
| 54511 | 38 | 126 | 412 | GFP-like |
| 54518 | 13 | 45 | 125 | Transcriptional factor tubby, C-terminal domain |
| 54523 | 93 | 407 | 648 | Pilin |
| 54529 | 20 | 35 | 71 | Acidic mitochondrial matrix protein p32 |
| 54534 | 216 | 689 | 1050 | FKBP-like |
| 54552 | 6 | 12 | 23 | Colicin E3 immunity protein |
| 54556 | 170 | 308 | 620 | Chitinase insertion domain |
| 54565 | 114 | 126 | 270 | Ribosomal protein S16 |
| 54570 | 176 | 224 | 441 | Ribosomal protein S19 |
| 54575 | 45 | 106 | 133 | Ribosomal protein L31e |
| 54580 | 17 | 22 | 40 | Allophycocyanin linker chain (domain) |
| 54585 | 54 | 93 | 197 | Cdc48 domain 2-like |
| 54593 | 183 | 529 | 817 | Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |
| 54611 | 37 | 42 | 86 | Bacterial protein-export protein SecB |
| 54616 | 11 | 17 | 34 | DNA-binding domain of Mlu1-box binding protein MBP1 |
| 54621 | 10 | 10 | 27 | Heme-binding protein A (HasA) |
| 54626 | 33 | 46 | 98 | Chalcone isomerase |
| 54631 | 119 | 285 | 453 | CBS-domain |
| 54637 | 142 | 447 | 556 | Thioesterase/thiol ester dehydrase-isomerase |
| 54648 | 19 | 47 | 104 | Dynein light chain 8 (DLC8) |
| 54654 | 41 | 119 | 184 | CI-2 family of serine protease inhibitors |
| 54665 | 114 | 231 | 525 | CO dehydrogenase molybdoprotein N-domain-like |
| 54675 | 89 | 122 | 229 | Quinolinic acid phosphoribosyltransferase, N-terminal domain |
| 54680 | 50 | 56 | 106 | Pyrimidine nucleoside phosphorylase C-terminal domain |
| 54686 | 179 | 228 | 328 | Ribosomal protein L10e |
| 54690 | 77 | 89 | 160 | Molybdopterin synthase subunit MoaE |
| 54695 | 76 | 478 | 967 | POZ domain |
| 54713 | 115 | 142 | 301 | Elongation factor Ts (EF-Ts), dimerisation domain |
| 54719 | 338 | 494 | 1120 | Fe,Mn superoxide dismutase (SOD), C-terminal domain |
| 54736 | 134 | 183 | 376 | ClpS-like |
| 54742 | 14 | 30 | 61 | Transcription-state regulator AbrB, the N-terminal DNA recognition domain |
| 54747 | 138 | 160 | 316 | Ribosomal protein L11, N-terminal domain |
| 54752 | 180 | 221 | 467 | RecA protein, C-terminal domain |
| 54762 | 14 | 29 | 60 | Signal recognition particle alu RNA binding heterodimer, SRP9/14 |
| 54768 | 174 | 428 | 693 | dsRNA-binding domain-like |
| 54782 | 98 | 111 | 233 | Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain |
| 54786 | 6 | 6 | 13 | PI-Pfui intein middle domain |
| 54791 | 101 | 331 | 756 | Eukaryotic type KH-domain (eKH-domain) |
| 54806 | 11 | 17 | 24 | Alpha-lytic protease prodomain |
| 54810 | 107 | 120 | 265 | GMP synthetase C-terminal dimerisation domain |
| 54814 | 210 | 436 | 718 | Prokaryotic type KH domain (pKH-domain) |
| 54821 | 202 | 234 | 434 | Ribosomal protein S3 C-terminal domain |
| 54826 | 281 | 620 | 1202 | Enolase N-terminal domain-like |
| 54843 | 165 | 268 | 465 | Ribosomal protein L22 |
| 54849 | 473 | 775 | 1496 | GroEL-intermediate domain like |
| 54857 | 15 | 29 | 54 | DNA damage-inducible protein DinI |
| 54862 | 260 | 1071 | 1316 | 4Fe-4S ferredoxins |
| 54893 | 33 | 37 | 95 | Aspartate carbamoyltransferase, Regulatory-chain, N-terminal domain |
| 54897 | 110 | 325 | 512 | Protease propeptides/inhibitors |
| 54909 | 10 | 12 | 19 | Dimeric alpha+beta barrel |
| 54913 | 94 | 184 | 395 | GlnB-like |
| 54919 | 143 | 223 | 507 | Nucleoside diphosphate kinases |
| 54928 | 170 | 1617 | 3519 | RNA-binding domain, RBD |
| 54957 | 115 | 164 | 313 | Viral DNA-binding domain |
| 54966 | 6834 | 7260 | 8995 | RuBisCO, large subunit, small (N-terminal) domain |
| 54975 | 97 | 156 | 190 | Acylphosphatase-like |
| 54980 | 208 | 302 | 580 | EF-G/eEF-2 domains III and V |
| 54984 | 58 | 95 | 228 | eEF-1beta-like |
| 54991 | 100 | 117 | 186 | Anticodon-binding domain of PheRS |
| 54995 | 99 | 111 | 154 | Ribosomal protein S6 |
| 54999 | 146 | 184 | 343 | Ribosomal protein S10 |
| 55003 | 17 | 36 | 91 | Poly(A) polymerase, C-terminal domain |
| 55008 | 210 | 471 | 903 | Metal-binding domain |
| 55021 | 153 | 439 | 565 | Regulatory domain in the aminoacid metabolism |
| 55031 | 95 | 236 | 268 | Bacterial exopeptidase dimerisation domain |
| 55035 | 114 | 150 | 320 | NAD-binding domain of HMG-CoA reductase |
| 55040 | 93 | 103 | 227 | Molybdenum cofactor biosynthesis protein C, MoaC |
| 55044 | 8 | 10 | 26 | TRADD, N-terminal domain |
| 55048 | 110 | 222 | 313 | Probable ACP-binding domain of malonyl-CoA ACP transacylase |
| 55052 | 8 | 11 | 28 | CheY-binding domain of CheA |
| 55056 | 4 | 4 | 14 | Killer toxin KP6 alpha-subunit |
| 55060 | 130 | 277 | 375 | GHMP Kinase |
| 55064 | 8 | 9 | 16 | Translational regulator protein regA |
| 55068 | 109 | 183 | 393 | Peptide methionine sulfoxide reductase |
| 55073 | 64 | 304 | 709 | Adenylyl and guanylyl cyclase catalytic domain |
| 55083 | 84 | 110 | 221 | 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK |
| 55088 | 20 | 70 | 190 | Methyl-coenzyme M reductase subunits |
| 55103 | 94 | 263 | 398 | FAD-linked oxidases, C-terminal domain |
| 55112 | 18 | 24 | 64 | Formylmethanofuran:tetrahydromethanopterin formyltransferase |
| 55116 | 18 | 24 | 51 | Formiminotransferase domain of formiminotransferase-cyclodeaminase. |
| 55120 | 135 | 313 | 438 | Pseudouridine synthase |
| 55124 | 114 | 190 | 247 | Sulfite reductase, domains 1 and 3 |
| 55129 | 110 | 202 | 237 | Ribosomal protein L30p/L7e |
| 55136 | 46 | 102 | 119 | Probable bacterial effector-binding domain |
| 55144 | 4 | 5 | 22 | tRNA splicing product Appr>p cyclic nucleotide phosphodiesterase |
| 55149 | 8 | 9 | 29 | Pepsin inhibitor-3 |
| 55154 | 5 | 7 | 25 | mRNA triphosphatase CET1 |
| 55159 | 71 | 129 | 237 | eIF1-like |
| 55166 | 68 | 102 | 188 | Hedgehog/DD-pepidase |
| 55174 | 769 | 869 | 1328 | Alpha-L RNA-binding motif |
| 55186 | 115 | 216 | 406 | Threonyl-tRNA synthetase (ThrRS), second 'additional' domain |
| 55190 | 112 | 130 | 161 | Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain |
| 55194 | 103 | 128 | 294 | Ribosome recycling factor, RRF |
| 55200 | 102 | 114 | 293 | Translation initiation factor IF3, C-terminal domain |
| 55205 | 158 | 339 | 658 | EPT/RTPC-like |
| 55216 | 10 | 11 | 23 | C-terminal domain of TolA |
| 55221 | 5 | 7 | 16 | Yest killer toxins |
| 55229 | 23 | 26 | 47 | Cell division protein MinE topological specificity domain |
| 55234 | 22 | 27 | 52 | Cyanase C-terminal domain |
| 55239 | 205 | 338 | 809 | RuBisCO, small subunit |
| 55248 | 57 | 69 | 130 | Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) |
| 55252 | 42 | 55 | 119 | C-terminal domain of arginine repressor |
| 55257 | 185 | 274 | 372 | RBP11-like subunits of RNA polymerase |
| 55261 | 111 | 131 | 261 | Prokaryotic AspRS, insert domain |
| 55267 | 13 | 13 | 20 | tRNA splicing endonuclease EdnA, N-terminal domain |
| 55271 | 108 | 144 | 328 | DNA repair protein MutS, domain I |
| 55277 | 5 | 6 | 21 | GYF domain |
| 55282 | 173 | 218 | 428 | Ribosomal protein L5 |
| 55287 | 44 | 84 | 139 | RPB5-like RNA polymerase subunit |
| 55298 | 109 | 266 | 463 | YjgF-like |
| 55307 | 519 | 1078 | 2131 | Tubulin, C-terminal domain |
| 55315 | 102 | 413 | 622 | L30e-like |
| 55326 | 112 | 216 | 395 | Aminoimidazole ribonucleotide synthetase (PurM) N-terminal domain |
| 55331 | 88 | 164 | 259 | Tautomerase/MIF |
| 55347 | 138 | 442 | 624 | Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain |
| 55383 | 8 | 38 | 58 | Copper amine oxidase, domain N |
| 55387 | 33 | 43 | 97 | Frataxin-like |
| 55394 | 18 | 62 | 129 | Bactericidal permeability-increasing protein, BPI |
| 55399 | 33 | 37 | 75 | Subtilisin inhibitor |
| 55405 | 25 | 38 | 100 | RNA bacteriophage capsid protein |
| 55418 | 33 | 82 | 186 | Translation initiation factor eIF4e |
| 55424 | 240 | 594 | 1209 | FAD/NAD-linked reductases, dimerisation (C-terminal) domain |
| 55447 | 72 | 165 | 306 | CO dehydrogenase flavoprotein C-terminal domain-like |
| 55455 | 142 | 570 | 1033 | SRF-like |
| 55464 | 128 | 167 | 472 | Origin of replication-binding domain, RBD-like |
| 55469 | 105 | 320 | 602 | NADH oxidase/flavin reductase |
| 55481 | 54 | 66 | 152 | N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 |
| 55486 | 156 | 675 | 1305 | Metalloproteases ("zincins"), catalytic domain |
| 55545 | 53 | 90 | 141 | beta-N-acetylhexosaminidase-like domain |
| 55550 | 82 | 612 | 1651 | SH2 domain |
| 55594 | 99 | 169 | 346 | HPr-like |
| 55604 | 69 | 201 | 353 | Glucose permease domain IIB |
| 55608 | 164 | 333 | 430 | Homing endonucleases |
| 55620 | 166 | 471 | 726 | Tetrahydrobiopterin biosynthesis enzymes-like |
| 55637 | 15 | 26 | 58 | Cell cycle regulatory proteins |
| 55648 | 5 | 7 | 18 | beta-lactamase-inhibitor protein, BLIP |
| 55653 | 93 | 100 | 187 | Ribosomal protein L9 C-domain |
| 55658 | 109 | 135 | 199 | L9 N-domain-like |
| 55666 | 110 | 134 | 264 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domains 2 and 5 |
| 55671 | 31 | 1765 | 3280 | Regulatory factor Nef |
| 55676 | 8 | 18 | 50 | Mosquitocidal delta-endotoxin CytB |
| 55681 | 172 | 1336 | 2479 | Class II aaRS and biotin synthetases |
| 55711 | 10 | 32 | 115 | Clathrin adaptor appendage domain |
| 55718 | 64 | 120 | 225 | Sterol carrier protein, SCP |
| 55724 | 11 | 15 | 31 | Ran-binding protein mog1p |
| 55729 | 163 | 638 | 985 | Acyl-CoA N-acyltransferases (Nat) |
| 55753 | 71 | 278 | 550 | Actin depolymerizing proteins |
| 55770 | 78 | 151 | 303 | Profilin (actin-binding protein) |
| 55781 | 99 | 223 | 306 | GAF domain-like |
| 55785 | 101 | 463 | 658 | PYP-like sensor domain (PAS domain) |
| 55797 | 95 | 289 | 499 | PR-1-like |
| 55804 | 101 | 325 | 562 | Phoshotransferase/anion transport protein |
| 55811 | 137 | 501 | 653 | Nudix |
| 55816 | 77 | 159 | 221 | 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain |
| 55821 | 136 | 337 | 500 | YrdC/RibB |
| 55826 | 87 | 187 | 260 | Hypothetical protein HI1434 (YbaK homologue) |
| 55831 | 159 | 235 | 535 | Thymidylate synthase/dCMP hydroxymethylase |
| 55846 | 97 | 193 | 232 | N-acetylmuramoyl-L-alanine amidase-like |
| 55856 | 125 | 272 | 579 | Cytochrome b5 |
| 55869 | 20 | 23 | 49 | DNA topoisomerase I domain |
| 55874 | 431 | 1443 | 2507 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |
| 55890 | 9 | 9 | 28 | Sporulation responce regulatory protein Spo0B |
| 55895 | 98 | 359 | 637 | Ribonuclease Rh-like |
| 55904 | 49 | 74 | 118 | Ornithine decarboxylase C-terminal domain |
| 55909 | 125 | 211 | 342 | Pentein |
| 55920 | 138 | 366 | 807 | Creatinase/aminopeptidase |
| 55931 | 226 | 385 | 845 | Glutamine synthase/guanido kinase |
| 55945 | 105 | 168 | 374 | TATA-box binding protein-like |
| 55957 | 50 | 69 | 196 | Phosphoglucomutase, C-terminal domain |
| 55961 | 189 | 644 | 971 | Bet v1-like |
| 55973 | 138 | 204 | 447 | S-adenosylmethionine synthetase |
| 55979 | 207 | 323 | 519 | DNA clamp |
| 56003 | 109 | 242 | 518 | Molybdemum cofactor-binding domain |
| 56014 | 179 | 286 | 368 | Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 |
| 56019 | 13 | 27 | 72 | The spindle assembly checkpoint protein mad2 |
| 56024 | 136 | 337 | 443 | Phospholipase D/nuclease |
| 56029 | 44 | 57 | 92 | Monooxygenase (hydroxylase) regulatory protein |
| 56037 | 123 | 163 | 279 | B3/B4 domain of PheRS, PheT |
| 56042 | 110 | 130 | 287 | Aminoimidazole ribonucleotide synthetase (PurM) C-terminal domain |
| 56047 | 185 | 239 | 463 | Ribosomal protein S8 |
| 56053 | 166 | 234 | 404 | Ribosomal protein L6 |
| 56059 | 277 | 1265 | 2578 | Glutathione synthetase ATP-binding domain-like |
| 56091 | 184 | 344 | 562 | DNA ligase/mRNA capping enzyme, catalytic domain |
| 56104 | 117 | 225 | 360 | SAICAR synthase-like |
| 56112 | 541 | 6467 | 13407 | Protein kinase-like (PK-like) |
| 56176 | 171 | 561 | 842 | FAD-binding domain |
| 56194 | 85 | 97 | 214 | Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain |
| 56199 | 23 | 24 | 67 | Methenyltetrahydromethanopterin cyclohydrolase |
| 56204 | 21 | 167 | 425 | Ubiquitin-protein ligase E3a, Hect catalytic domain (E6ap) |
| 56209 | 20 | 24 | 49 | Nitrile hydratase alpha chain |
| 56214 | 122 | 196 | 311 | 4'-phosphopantetheinyl transferase |
| 56219 | 124 | 374 | 745 | DNase I-like |
| 56228 | 21 | 50 | 110 | Aldehyde ferredoxin oxidoreductase, N-terminal domain |
| 56235 | 216 | 867 | 1424 | N-terminal nucleophile aminohydrolases (Ntn hydrolases) |
| 56266 | 27 | 36 | 67 | L-aminopeptidase D-Ala-esterase/amidase |
| 56271 | 4 | 6 | 7 | Histidine decarboxylase |
| 56276 | 49 | 77 | 171 | S-adenosylmethionine decarboxylase |
| 56281 | 163 | 697 | 977 | Metallo-hydrolase/oxidoreductase |
| 56295 | 56 | 210 | 331 | Protein serine/threonine phosphatase 2 |
| 56300 | 86 | 390 | 827 | Metallo-dependent phosphatases |
| 56317 | 115 | 259 | 480 | Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase |
| 56322 | 142 | 313 | 619 | ADC synthase |
| 56327 | 263 | 534 | 1317 | Lactate & malate dehydrogenases, C-terminal domain |
| 56349 | 205 | 437 | 744 | DNA breaking-rejoining enzymes |
| 56366 | 17 | 79 | 240 | SMAD MH1 domain |
| 56371 | 73 | 225 | 547 | Ribosome inactivating proteins (RIP) |
| 56399 | 33 | 111 | 283 | ADP-ribosylation |
| 56420 | 102 | 157 | 314 | Peptide deformylase |
| 56425 | 188 | 317 | 617 | Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain |
| 56436 | 160 | 863 | 2031 | C-type lectin-like |
| 56487 | 26 | 123 | 342 | Scavenger receptor cysteine-rich (SRCR) domain |
| 56491 | 19 | 30 | 111 | A heparin-binding domain |
| 56496 | 41 | 218 | 583 | Fibrinogen C-terminal domain-like |
| 56502 | 57 | 9537 | 11774 | gp120 core |
| 56507 | 58 | 65 | 135 | Methionine synthase activation domain-like |
| 56512 | 33 | 77 | 255 | Nitric oxide (NO) synthase oxygenase domain |
| 56519 | 86 | 185 | 303 | Penicillin binding protein dimerisation domain |
| 56524 | 105 | 181 | 278 | Sulfite oxidase, middle catalytic domain |
| 56529 | 103 | 289 | 517 | FAH |
| 56534 | 42 | 77 | 198 | Aromatic aminoacid monoxygenases, catalytic and oligomerization domains |
| 56542 | 109 | 162 | 303 | Substrate-binding domain of HMG-CoA reductase |
| 56548 | 21 | 27 | 55 | Conserved core of transcriptional regulatory protein vp16 |
| 56553 | 188 | 222 | 374 | Insert subdomain of RNA polymerase alpha subunit |
| 56558 | 6 | 6 | 14 | Baseplate structural protein gp11 |
| 56563 | 57 | 97 | 133 | Major capsid protein gp5 |
| 56568 | 11 | 22 | 41 | Non-globular alpha+beta subunits of globular proteins |
| 56574 | 114 | 564 | 1021 | Serpins |
| 56596 | 9 | 12 | 24 | Replication terminator protein (Tus) |
| 56601 | 233 | 1083 | 2121 | beta-Lactamase/D-ala carboxypeptidase |
| 56629 | 8 | 13 | 46 | ADP ribosyl cyclase-like |
| 56634 | 129 | 240 | 295 | Heme-linked catalases |
| 56645 | 89 | 504 | 913 | Acyl-CoA dehydrogenase NM domain-like |
| 56655 | 155 | 437 | 832 | Sugar phosphatases |
| 56712 | 127 | 244 | 512 | Prokaryotic type I DNA topoisomerase |
| 56719 | 180 | 324 | 792 | Type II DNA topoisomerase |
| 56726 | 27 | 34 | 76 | DNA topoisomerase IV, alpha subunit |
| 56731 | 117 | 173 | 320 | DNA primase DnaG catalytic core |
| 56736 | 82 | 114 | 241 | DNA repair protein MutM (Fpg) |
| 56741 | 27 | 36 | 120 | Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment |
| 56747 | 32 | 38 | 58 | DNA primase |
| 56752 | 112 | 239 | 517 | D-aminoacid aminotransferase-like PLP-dependent enzymes |
| 56762 | 143 | 257 | 408 | Nickel-iron hydrogenase, large subunit |
| 56770 | 134 | 227 | 330 | Nickel-iron hydrogenase, small subunit |
| 56778 | 394 | 771 | 1416 | Heat shock protein 70kD (HSP70), C-terminal substrate-binding fragment |
| 56784 | 190 | 784 | 1016 | HAD-like |
| 56796 | 132 | 311 | 498 | Dehydroquinate synthase-like |
| 56801 | 201 | 813 | 1278 | Firefly luciferase-like |
| 56808 | 152 | 221 | 401 | Ribosomal protein L1 |
| 56815 | 24 | 100 | 158 | Sec1/munc18-like (SM) proteins |
| 56821 | 37 | 74 | 155 | Prismane protein-like |
| 56826 | 9 | 10 | 30 | Upper collar protein gp10 (connector protein) |
| 56831 | 15 | 40 | 88 | BTV inner layer core protein vp3 |
| 56837 | 25 | 51 | 135 | Colicin |
| 56845 | 4 | 10 | 44 | Diphtheria toxin, middle domain |
| 56849 | 25 | 150 | 401 | delta-Endotoxin (insectocide), N-terminal domain |
| 56854 | 39 | 165 | 316 | Bcl-2 inhibitors of programmed cell death |
| 56864 | 3 | 4 | 18 | Exotoxin A, middle domain |
| 56918 | 35 | 102 | 155 | Light-harvesting complex subunits |
| 56925 | 174 | 396 | 574 | OMPA-like |
| 56931 | 19 | 25 | 46 | Outer membrane phospholipase A (OMPLA) |
| 56935 | 92 | 718 | 988 | Porins |
| 56954 | 70 | 239 | 302 | Integral outer membrane protein TolC, efflux pump component |
| 56959 | 17 | 56 | 170 | Leukocidin (pore-forming toxin) |
| 56973 | 9 | 30 | 88 | (Pro)aerolysin, pore-forming lobe |
| 56978 | 25 | 47 | 150 | Perfringolysin |
| 56983 | 48 | 374 | 1006 | Viral glycoprotein, central and dimerisation domains |
| 56988 | 5 | 7 | 72 | Anthrax protective antigen |
| 56994 | 90 | 166 | 259 | Insulin-like |
| 57007 | 3 | 3 | 8 | Heat-stable enterotoxin B |
| 57011 | 5 | 8 | 10 | Neurotoxin B-IV |
| 57016 | 82 | 177 | 381 | Plant lectins/antimicrobial peptides |
| 57027 | 24 | 43 | 57 | Plant inhibitors of proteinases and amylases |
| 57038 | 10 | 26 | 38 | Cyclotides |
| 57048 | 8 | 11 | 26 | Gurmarin-like |
| 57055 | 9 | 14 | 34 | Agouti-related protein |
| 57059 | 27 | 63 | 91 | omega toxin-like |
| 57095 | 91 | 325 | 464 | Scorpion toxin-like |
| 57180 | 46 | 106 | 203 | Cellulose-binding domain |
| 57184 | 40 | 206 | 359 | Growth factor receptor domain |
| 57190 | 16 | 33 | 81 | Colipase-like |
| 57196 | 152 | 1066 | 1854 | EGF/Laminin |
| 57243 | 5 | 6 | 6 | Bromelain inhibitor VI (cysteine protease inhibitor) |
| 57247 | 49 | 125 | 231 | Bowman-Birk inhibitor, BBI |
| 57256 | 15 | 35 | 66 | Elafin-like |
| 57262 | 18 | 45 | 76 | Leech antihemostatic proteins |
| 57277 | 4 | 8 | 18 | Granulin repeat |
| 57283 | 12 | 22 | 45 | PMP inhibitors |
| 57288 | 12 | 27 | 61 | Midkine |
| 57296 | 1 | 1 | 4 | Amb V allergen |
| 57302 | 95 | 538 | 913 | Snake toxin-like |
| 57362 | 96 | 320 | 704 | BPTI-like |
| 57392 | 36 | 76 | 163 | Defensin-like |
| 57414 | 17 | 36 | 90 | Hairpin loop containing domain-like |
| 57419 | 2 | 2 | 3 | Neurotoxin III (ATX III) |
| 57424 | 38 | 241 | 525 | LDL receptor-like module |
| 57429 | 24 | 67 | 134 | Crambin-like |
| 57440 | 67 | 278 | 666 | Kringle-like |
| 57467 | 173 | 371 | 642 | Ovomucoid/PCI-1 like inhibitors |
| 57492 | 35 | 82 | 157 | Trefoil |
| 57501 | 319 | 945 | 1890 | Cystine-knot cytokines |
| 57535 | 81 | 367 | 908 | Complement control module/SCR domain |
| 57546 | 9 | 22 | 31 | Sea anemone toxin k |
| 57552 | 66 | 242 | 577 | Blood coagulation inhibitor (disintegrin) |
| 57561 | 9 | 11 | 34 | Methylamine dehydrogenase, L chain |
| 57567 | 43 | 157 | 237 | Serine proterase inhibitors |
| 57581 | 11 | 41 | 106 | TB module/8-cys domain |
| 57586 | 12 | 18 | 64 | TNF receptor-like |
| 57593 | 20 | 34 | 99 | Heparin-binding domain from vascular endothelial growth factor |
| 57598 | 4 | 5 | 12 | Antifungal protein (AGAFP) |
| 57603 | 20 | 49 | 147 | Fibronectin type I module |
| 57610 | 28 | 118 | 242 | Thyroglobulin type-1 domain |
| 57615 | 11 | 24 | 38 | Type X cellulose binding domain, CBDX |
| 57620 | 6 | 9 | 17 | Carboxypeptidase inhibitor |
| 57625 | 31 | 149 | 201 | Tachycitin |
| 57630 | 8 | 11 | 35 | GLA-domain |
| 57642 | 5 | 7 | 21 | Cholecystokinin A receptor, N-domain |
| 57647 | 11 | 570 | 1050 | HIV-1 VPU cytoplasmic domain |
| 57652 | 23 | 37 | 69 | HIPIP (high potential iron protein) |
| 57662 | 22 | 26 | 50 | Ferredoxin thioredoxin reductase (FTR), catalytic beta chain |
| 57667 | 404 | 2347 | 4331 | C2H2 and C2HC zinc fingers |
| 57701 | 42 | 173 | 361 | Zn2/Cys6 DNA-binding domain |
| 57716 | 269 | 867 | 1458 | Glucocorticoid receptor-like (DNA-binding domain) |
| 57756 | 96 | 841 | 2243 | Retrovirus zinc finger-like domains |
| 57770 | 62 | 67 | 147 | Methionyl-tRNA synthetase (MetRS), Zn-domain |
| 57774 | 98 | 153 | 369 | Microbial and mitochondrial ADK, insert "zinc finger" domain |
| 57783 | 86 | 202 | 324 | Zinc beta-ribbon |
| 57798 | 20 | 38 | 98 | Casein kinase II beta subunit |
| 57802 | 98 | 196 | 253 | Rubredoxin-like |
| 57821 | 3 | 3 | 4 | Hypothetical protein MTH1184 |
| 57825 | 31 | 36 | 73 | Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain |
| 57829 | 67 | 170 | 220 | Zn-binding ribosomal proteins |
| 57840 | 87 | 97 | 169 | Ribosomal protein L36 |
| 57845 | 7 | 90 | 227 | B-box zinc-binding domain |
| 57850 | 194 | 840 | 1535 | RING finger domain, C3HC4 |
| 57863 | 19 | 138 | 378 | Pyk2-associated protein beta ARF-GAP domain |
| 57868 | 142 | 286 | 410 | Metallothionein |
| 57879 | 6 | 10 | 25 | Zinc domain conserved in yeast copper-regulated transcription factors |
| 57884 | 38 | 50 | 100 | Ada DNA repair protein, N-terminal domain (N-Ada 10) |
| 57889 | 58 | 266 | 682 | Cysteine-rich domain |
| 57903 | 42 | 364 | 634 | FYVE/PHD zinc finger |
| 57917 | 26 | 35 | 66 | Zn-binding domains of ADDBP |
| 57924 | 53 | 139 | 344 | Inhibitor of apoptosis (IAP) repeat |
| 57933 | 15 | 36 | 79 | TAZ domain |
| 57938 | 150 | 196 | 436 | Cysteine-rich domain of the chaperone protein DnaJ. |
| 63380 | 269 | 730 | 1286 | Riboflavin synthase domain-like |
| 63393 | 67 | 133 | 192 | RBP12 subunit of RNA polymerase II |
| 63411 | 147 | 426 | 790 | LuxS/MPP-like metallohydrolase |
| 63418 | 91 | 209 | 358 | MurE/MurF N-terminal domain |
| 63433 | 19 | 25 | 54 | Fumarylacetoacetate hydrolase, FAH, N-terminal domain |
| 63446 | 22 | 137 | 258 | Type I dockerin domain |
| 63451 | 12 | 37 | 90 | LEM domain |
| 63491 | 20 | 24 | 55 | BAG domain |
| 63501 | 25 | 135 | 364 | Frizzled cystein-rich domain |
| 63515 | 42 | 223 | 586 | Outer surface protein C (OspC) |
| 63520 | 39 | 150 | 239 | PTS-regulatory domain, PRD |
| 63562 | 4 | 4 | 11 | RNA polymerase omega subunit |
| 63570 | 36 | 97 | 215 | PABC (PABP) domain |
| 63592 | 15 | 16 | 42 | Flagellar transcriptional activator FlhD |
| 63600 | 12 | 21 | 71 | Telomeric repeat binding factor (TRF) dimerisation domain |
| 63697 | 5 | 9 | 39 | Olfactory marker protein |
| 63707 | 5 | 11 | 40 | Ganglioside M2 (gm2) activator |
| 63712 | 31 | 186 | 261 | Nicotinic receptor ligand binding domain-like |
| 63724 | 4 | 8 | 37 | Equinatoxin II (eqtII, tenebrosin C) |
| 63732 | 14 | 16 | 41 | Lactobacillus maltose phosphorylase, N-terminal domain |
| 63737 | 77 | 203 | 277 | Leukotriene A4 hydrolase N-terminal domain |
| 63748 | 25 | 179 | 320 | Tudor/PWWP |
| 63763 | 10 | 38 | 128 | SAND domain-like |
| 63817 | 30 | 77 | 101 | Sortase |
| 63825 | 70 | 314 | 534 | Low density lipoprotein (LDL) receptor YWTD domain |
| 63829 | 50 | 202 | 257 | Diisopropylfluorophosphatase (phosphotriesterase, DFP) |
| 63840 | 11 | 15 | 34 | Ribonuclease domain of colicin E3 |
| 63848 | 49 | 55 | 78 | Cell-division inhibitor MinC, C-terminal domain |
| 63862 | 12 | 15 | 50 | Thiamin pyrophosphokinase, substrate-binding domain |
| 63867 | 80 | 110 | 141 | Molybdenum cofactor biosynthesis protein MoeA, C-terminal domain |
| 63877 | 3 | 22 | 108 | Methuselah ectodomain |
| 63882 | 95 | 157 | 313 | Molybdenum cofactor biosynthesis protein MoeA, N-terminal and linker domains |
| 63887 | 66 | 114 | 267 | P-domain of calnexin/calreticulin |
| 63892 | 47 | 56 | 136 | Pyridoxine 5'-phosphate synthase |
| 63965 | 55 | 65 | 125 | Precorrin-8x methylmutase |
| 63992 | 17 | 18 | 44 | Dipeptide transport protein |
| 63999 | 44 | 57 | 94 | Thiamin pyrophosphokinase, catalytic domain |
| 64005 | 118 | 190 | 400 | Undecaprenyl diphosphate synthase |
| 64043 | 4 | 4 | 9 | Cell-division inhibitor MinC, N-terminal domain |
| 64076 | 41 | 55 | 81 | Hypothetical protein MT938 (MTH938) |
| 64153 | 84 | 101 | 141 | YjeF N-terminal domain-like |
| 64158 | 69 | 81 | 183 | 2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain |
| 64167 | 66 | 83 | 172 | SurE-like |
| 64182 | 102 | 234 | 295 | DHH phosphoesterases |
| 64197 | 93 | 111 | 186 | AICAR transformylase domain of bifunctional purine biosynthesis enzyme ATIC |
| 64210 | 6 | 8 | 16 | Head-to-tail joining protein W, gpW |
| 64234 | 35 | 42 | 90 | Photosystem I subunit PsaD |
| 64263 | 97 | 113 | 239 | Prokaryotic ribosomal protein L17 |
| 64268 | 24 | 182 | 310 | PX domain |
| 64288 | 38 | 45 | 57 | Chorismate lyase |
| 64307 | 78 | 151 | 220 | SirA-like |
| 64325 | 60 | 127 | 197 | Dimeric C-terminal domain of membrane protein TonB |
| 64356 | 18 | 61 | 112 | SNARE-like |
| 64376 | 46 | 50 | 74 | YlxR-like |
| 64383 | 23 | 25 | 74 | Cell-division protein ZipA, C-terminal domain |
| 64397 | 61 | 69 | 123 | Hsp33 domain |
| 64438 | 4 | 8 | 52 | Type 1 cytotoxic necrotizing factor, catalytic domain |
| 64449 | 6 | 10 | 28 | YopH tyrosine phosphatase N-terminal domain |
| 64465 | 11 | 46 | 80 | Outer capsid protein sigma 3 |
| 64496 | 7 | 9 | 19 | DNA-binding domain of intron endonuclease I-TevI |
| 64501 | 36 | 72 | 145 | Ku heterodimer subunits |
| 64518 | 96 | 264 | 500 | F41 fragment of flagellin |
| 64546 | 7 | 8 | 19 | Satiety factor CART (cocaine and amphetamine regulated transcript) |
| 64571 | 8 | 30 | 60 | Cellulose docking domain, dockering |
| 64586 | 40 | 43 | 55 | C-terminal domain of ProRS |
| 68906 | 9 | 12 | 26 | SAP domain |
| 68912 | 38 | 44 | 99 | Rho termination factor, N-terminal domain |
| 68918 | 4 | 4 | 15 | Recombination endonuclease VII, C-terminal and dimerization domains |
| 68923 | 98 | 129 | 309 | PEP carboxykinase N-terminal domain |
| 68930 | 2 | 2 | 8 | Protein-L-isoaspartyl O-methyltransferase, C-terminal domain |
| 68989 | 7 | 14 | 30 | Hemolysin expression modulating protein HHA |
| 68993 | 14 | 20 | 68 | FAT domain of focal adhesion kinase |
| 69000 | 22 | 47 | 101 | Thiol oxidase Erv2p |
| 69008 | 13 | 15 | 20 | RecG, N-terminal domain |
| 69012 | 23 | 48 | 128 | alpha-ketoacid dehydrogenase kinase, N-terminal domain |
| 69025 | 7 | 9 | 17 | Hypothetical protein MTH865 |
| 69036 | 4 | 9 | 35 | Bcr-Abl oncoprotein oligomerization domain |
| 69047 | 19 | 32 | 50 | Hypothetical protein YjbJ |
| 69055 | 75 | 80 | 163 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain |
| 69060 | 10 | 18 | 46 | Arp2/3 complex 21 kDa subunit ARPC3 |
| 69065 | 108 | 157 | 257 | RNase III endonuclease catalytic domain |
| 69070 | 3 | 3 | 7 | Anti-sigma factor AsiA |
| 69075 | 15 | 20 | 29 | Glutamyl tRNA-reductase dimerization domain |
| 69099 | 4 | 5 | 24 | Ran-GTPase activating protein 1 (RanGAP1), C-terminal domain |
| 69103 | 15 | 22 | 44 | Arp2/3 complex 16 kDa subunit ARPC5 |
| 69118 | 15 | 17 | 43 | Antioxidant defence protein AhpD |
| 69125 | 9 | 22 | 64 | Nuclear receptor coactivator interlocking domain |
| 69131 | 3 | 5 | 11 | Quinohemoprotein amine dehydrogenase C chain |
| 69179 | 40 | 205 | 365 | Integrin domains |
| 69189 | 52 | 79 | 135 | Penicillin-binding protein 5, C-terminal domain |
| 69203 | 11 | 55 | 112 | Nucleoplasmin core |
| 69255 | 4 | 4 | 12 | Tail-associated lysozyme gp5, N-terminal domain |
| 69279 | 8 | 11 | 48 | Phage tail proteins |
| 69287 | 51 | 66 | 106 | Urease metallochaperone UreE, N-terminal domain |
| 69298 | 8 | 8 | 29 | Quinohemoprotein amine dehydrogenase A chain, domain 3 |
| 69304 | 55 | 213 | 260 | Tricorn protease N-terminal domain |
| 69318 | 38 | 163 | 331 | Integrin alpha N-terminal domain |
| 69322 | 58 | 207 | 269 | Tricorn protease N-terminal domain |
| 69336 | 106 | 149 | 299 | Alpha subunit of glutamate synthase, C-terminal domain |
| 69340 | 19 | 27 | 69 | C-terminal domain of adenylylcyclase associated protein |
| 69349 | 54 | 108 | 173 | Phage fibre proteins |
| 69360 | 25 | 126 | 298 | Choline binding domain of autolysin C-LytA |
| 69369 | 7 | 16 | 54 | Colicin E3 translocation domain |
| 69500 | 65 | 77 | 174 | D-Tyr tRNAtyr deacylase |
| 69572 | 113 | 213 | 397 | Molybdenum cofactor biosynthesis protein MoeB |
| 69593 | 18 | 21 | 78 | Glycerol-3-phosphate (1)-acyltransferase |
| 69618 | 94 | 125 | 150 | Uroporphyrinogen III synthase (U3S, HemD) |
| 69635 | 20 | 34 | 78 | Type III secretory system chaperone |
| 69645 | 15 | 41 | 98 | Arp2/3 complex subunits |
| 69652 | 6 | 6 | 13 | DNA-binding C-terminal domain of the transcription factor MotA |
| 69687 | 32 | 70 | 151 | Integrin beta tail domain |
| 69695 | 28 | 35 | 73 | SRP19 |
| 69705 | 95 | 111 | 187 | Transcription factor NusA, N-terminal domain |
| 69721 | 21 | 23 | 60 | DsrC, the gamma subunit of dissimilatory sulfite reductase |
| 69732 | 75 | 236 | 260 | Lrp/AsnC-like transcriptional regulator C-terminal domain |
| 69737 | 149 | 415 | 566 | Urease metallochaperone UreE, C-terminal domain |
| 69742 | 90 | 110 | 220 | Glutamyl tRNA-reductase catalytic, N-terminal domain |
| 69754 | 90 | 111 | 143 | Ribosome binding protein Y (YfiA homologue) |
| 69761 | 2 | 2 | 10 | GTP cyclohydrolase I feedback regulatory protein, GFRP |
| 69765 | 79 | 87 | 191 | 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF |
| 69786 | 48 | 52 | 74 | YggU-like |
| 69796 | 55 | 57 | 75 | Thymidylate synthase-complementing protein Thy1 |
| 69819 | 31 | 35 | 74 | MTH1598-like |
| 69848 | 14 | 30 | 70 | LCCL domain |
| 69864 | 99 | 121 | 165 | Argininosuccinate synthetase, C-terminal domain |
| 69898 | 37 | 92 | 172 | Golgi alpha-mannosidase II |
| 69903 | 13 | 35 | 70 | NSP3 homodimer |
| 69908 | 7 | 9 | 9 | Membrane penetration protein mu1 |
| 69917 | 11 | 22 | 63 | OMPT-like |
| 69922 | 42 | 161 | 586 | Head and neck region of the ectodomain of NDV fusion glycoprotein |
| 69959 | 3 | 5 | 10 | Serine proteinase inhibitor lekti, domain one |
| 69964 | 3 | 4 | 11 | Pheromone ER-23 |
| 74650 | 112 | 256 | 408 | Galactose mutarotase-like |
| 74653 | 14 | 17 | 32 | TolA/TonB C-terminal domain |
| 74731 | 144 | 162 | 313 | Ribosomal protein L20 |
| 74748 | 24 | 167 | 344 | Variable surface antigen VlsE |
| 74778 | 33 | 40 | 95 | Aconitase B, N-terminal domain |
| 74784 | 25 | 37 | 70 | Testis/brain RNA-binding protein (TB-RBP) |
| 74788 | 19 | 79 | 205 | Culin repeat |
| 74800 | 10 | 18 | 60 | C-terminal activation domain (CTAD) of HIF-1alpha |
| 74853 | 57 | 113 | 243 | Lamin A/C globular tail domain |
| 74863 | 25 | 32 | 75 | Thiol:disulfide interchange protein DsbD, N-terminal domain |
| 74877 | 7 | 23 | 71 | Major surface antigen p30, SAG1 |
| 74914 | 17 | 34 | 71 | V-region of surface antigen I/II (SA I/II, PAC) |
| 74924 | 20 | 68 | 183 | Cap-Gly domain |
| 74942 | 64 | 67 | 95 | YhbC-like, C-terminal domain |
| 74982 | 91 | 101 | 230 | Small protein B (SmpB) |
| 75001 | 7 | 8 | 32 | Dipeptidyl peptidase I (cathepsin C), exclusion domain |
| 75005 | 95 | 209 | 234 | alpha-L-arabinanase |
| 75011 | 1 | 2 | 11 | 3-carboxy-cis,cis-mucoante lactonizing enzyme |
| 75098 | 3 | 11 | 46 | Monomethylamine methyltransferase MtmB |
| 75138 | 58 | 86 | 140 | HPr kinase/phoshatase HprK N-terminal domain |
| 75169 | 19 | 21 | 37 | YchN-like |
| 75181 | 10 | 11 | 23 | Hypothetical protein MTH777 (MT0777) |
| 75217 | 118 | 261 | 310 | alpha/beta knot |
| 75304 | 120 | 241 | 298 | Amidase signature (AS) enzymes |
| 75347 | 14 | 28 | 49 | Rotavirus NSP2 fragment, C-terminal domain |
| 75399 | 14 | 45 | 108 | Plakin repeat |
| 75404 | 6 | 10 | 26 | VSV matrix protein |
| 75412 | 8 | 9 | 19 | Hypothetical protein MTH1880 |
| 75420 | 73 | 79 | 132 | YhbC-like, N-terminal domain |
| 75445 | 85 | 103 | 187 | D-ribose-5-phosphate isomerase (RpiA), lid domain |
| 75471 | 59 | 82 | 149 | YhbY-like |
| 75500 | 18 | 26 | 41 | Putative transcriptional regulator TM1602, C-terminal domain |
| 75516 | 50 | 115 | 146 | Pheromone-binding domain of LuxR-like quorum-sensing transcription factors |
| 75520 | 32 | 170 | 340 | Clathrin coat assembly domain |
| 75553 | 84 | 137 | 241 | Smc hinge domain |
| 75569 | 8 | 8 | 25 | Hypothetical protein MTH1020 |
| 75574 | 13 | 22 | 41 | Rotavirus NSP2 fragment, N-terminal domain |
| 75604 | 112 | 236 | 285 | Archaeosine tRNA-guanine transglycosylase, C-terminal additional domains |
| 75615 | 2 | 3 | 8 | Bifunctional dehydrogenase/ferrochelatase Met8p, dimerisation and C-terminal domains |
| 75620 | 101 | 231 | 487 | Polypeptide chain release factor 2 (RF2) |
| 75625 | 94 | 120 | 269 | YebC-like |
| 75632 | 19 | 85 | 236 | Culin homology domain |
| 75689 | 34 | 40 | 71 | Zinc-binding domain of translation initiation factor 2 beta |
| 75704 | 12 | 21 | 46 | Mitotic arrest deficient-like 1, Mad1 |
| 75708 | 25 | 32 | 71 | Chemotaxis phosphatase CheZ |
| 75712 | 51 | 106 | 192 | Rad50 coiled-coil Zn hook |
| 81271 | 98 | 139 | 287 | TGS-like |
| 81273 | 19 | 24 | 45 | H-NS histone-like proteins |
| 81277 | 8 | 13 | 32 | C-terminal domain of octopus hemocyanin |
| 81296 | 343 | 1381 | 2167 | E set domains |
| 81301 | 41 | 94 | 239 | Nucleotidyltransferase |
| 81382 | 27 | 84 | 106 | Skp1 dimerisation domain-like |
| 81383 | 21 | 208 | 268 | F-box domain |
| 81585 | 21 | 36 | 149 | DNA polymerase beta-like, second domain |
| 81593 | 13 | 16 | 46 | Nucleotidyltransferase substrate binding subunit/domain |
| 81601 | 13 | 26 | 72 | Protein serine/threonine phosphatase 2C, C-terminal domain |
| 81606 | 62 | 216 | 409 | Protein serine/threonine phosphatase 2C, catalytic domain |
| 81624 | 84 | 118 | 287 | N-terminal domain of MutM-like DNA repair proteins |
| 81631 | 18 | 34 | 111 | Poly(A) polymerase, middle domain |
| 81653 | 137 | 346 | 653 | Calcium ATPase, transduction domain A |
| 81660 | 127 | 330 | 581 | Calcium ATPase, ATP-binding domain N |
| 81698 | 9 | 25 | 52 | FF domain |
| 81710 | 8 | 8 | 21 | Plasmid maintenance system epsilon/zeta, antidote epsilon subunit |
| 81730 | 4 | 6 | 17 | beta-catenin-interacting protein ICAT |
| 81736 | 13 | 43 | 95 | Pollen allergen Phl P 6 |
| 81761 | 52 | 89 | 279 | X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal domain |
| 81767 | 117 | 155 | 344 | Pre-protein croslinking domain of SecA |
| 81778 | 32 | 90 | 178 | Crustacean CHH/MIH/GIH neurohormone |
| 81783 | 3 | 6 | 15 | C-terminal domain of DFF45/ICAD (DFF-C domain) |
| 81790 | 9 | 30 | 71 | Myosin phosphatase inhibitor 17kDa protein, CPI-17 |
| 81799 | 100 | 115 | 257 | Putative methyltransferase TM0872, insert domain |
| 81811 | 23 | 52 | 137 | Helical domain of Sec23/24 |
| 81822 | 10 | 15 | 41 | RuBisCo LSMT C-terminal, substrate-binding domain |
| 81827 | 74 | 171 | 221 | Porin chaperone SurA, peptide-binding domain |
| 81832 | 5 | 13 | 32 | GEF domain of SopE toxin |
| 81837 | 12 | 48 | 157 | BEACH domain |
| 81853 | 8 | 9 | 30 | Family 10 polysaccharide lyase |
| 81872 | 10 | 13 | 46 | BRCA2 helical domain |
| 81878 | 6 | 9 | 39 | BRCA2 tower domain |
| 81886 | 119 | 147 | 311 | Helical scaffold and wing domains of SecA |
| 81891 | 94 | 149 | 200 | tRNA CCA-adding enzyme, C-terminal domains |
| 81901 | 66 | 221 | 274 | Cysteine rich protein B (HcpB) |
| 81923 | 118 | 238 | 367 | Double Clp-N motif |
| 81930 | 5 | 14 | 44 | Orange carotenoid protein, N-terminal domain |
| 81935 | 65 | 90 | 164 | N-terminal domain of bifunctional PutA protein |
| 81982 | 4 | 4 | 6 | Antigen MPT63/MPB63 (immunoprotective extracellular protein) |
| 81986 | 8 | 8 | 43 | Tp47 lipoprotein, middle and C-terminal domains |
| 81995 | 15 | 51 | 122 | beta-sandwich domain of Sec23/24 |
| 82004 | 96 | 113 | 134 | N-utilization substance G protein NusG, insert domain |
| 82026 | 10 | 12 | 18 | Fucose-binding lectin II (PA-IIL) |
| 82046 | 1 | 2 | 15 | Viral chemokine binding protein m3 |
| 82051 | 103 | 234 | 427 | Obg GTP-binding protein N-terminal domain |
| 82057 | 6 | 23 | 71 | GW domain |
| 82061 | 3 | 5 | 8 | BAH domain |
| 82093 | 41 | 48 | 101 | Heme chaperone CcmE |
| 82109 | 19 | 39 | 109 | IP3 receptor type 1 binding core, domain 1 |
| 82114 | 93 | 106 | 137 | Riboflavin kinase |
| 82153 | 55 | 119 | 205 | FAS1 domain |
| 82171 | 78 | 217 | 302 | Dipeptidyl peptidase IV/CD26, N-terminal domain |
| 82185 | 39 | 180 | 243 | Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain |
| 82199 | 49 | 358 | 537 | SET domain |
| 82215 | 10 | 18 | 59 | C-terminal autoproteolytic domain of nucleoporin nup98 |
| 82220 | 1 | 1 | 41 | Tp47 lipoprotein, N-terminal domain |
| 82282 | 82 | 139 | 182 | Betaine-homocysteine S-methyltransferase |
| 82317 | 10 | 10 | 37 | Swiveling domain of the glycerol dehydratase reactivase alpha subunit |
| 82544 | 36 | 48 | 117 | Putative glycerate kinase (hypothetical protein TM1585) |
| 82549 | 40 | 103 | 170 | DegV-like |
| 82602 | 5 | 8 | 16 | Nuclease A inhibitor (NuiA) |
| 82607 | 78 | 88 | 154 | YbaB-like |
| 82615 | 3 | 4 | 28 | Polo domain |
| 82649 | 42 | 50 | 94 | SufE (YhnA) |
| 82653 | 93 | 105 | 139 | Probable GTPase Der, C-terminal domain |
| 82657 | 58 | 119 | 175 | BolA-like |
| 82671 | 3 | 3 | 19 | SEA domain |
| 82679 | 96 | 118 | 160 | N-utilization substance G protein NusG, N-terminal domain |
| 82689 | 84 | 205 | 273 | Mechanosensitive channel protein MscS (YggB), C-terminal domain |
| 82693 | 71 | 356 | 539 | Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains |
| 82697 | 57 | 61 | 81 | PurS subunit of FGAM synthetase |
| 82704 | 24 | 39 | 62 | DNA-binding protein Sso10b (AlbA) |
| 82708 | 7 | 10 | 25 | R3H domain |
| 82714 | 66 | 290 | 455 | Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains |
| 82754 | 22 | 59 | 129 | C-terminal, gelsolin-like domain of Sec23/24 |
| 82771 | 109 | 159 | 187 | GIY-YIG endonuclease |
| 82784 | 78 | 182 | 247 | Ohr/OsmC resistance proteins |
| 82808 | 8 | 8 | 22 | Replication modulator SeqA, C-terminal DNA-binding domain |
| 82829 | 35 | 41 | 65 | Putative cell cycle protein MesJ, middle and C-terminal domain |
| 82895 | 33 | 182 | 581 | TSP-1 type 1 repeat |
| 82910 | 13 | 45 | 264 | Apical membrane antigen 1 |
| 82919 | 15 | 45 | 118 | Zn-finger domain of Sec23/24 |
| 82927 | 27 | 76 | 167 | Cysteine-rich DNA binding domain, (DM domain) |
| 82931 | 12 | 21 | 54 | Tumor suppressor gene product Apc |
| 82936 | 12 | 16 | 32 | Apolipoprotein A-II |
