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STIFDB - 1000bp Information | TAIR Gene ID: AT2G42540
STIFdb - 1000bp TFmap : AT2G42540

AT2G42540_1000.png


Details of 1000bp TFmap | TAIR Gene ID: AT2G42540

No: Transcription Factor Z - Score Normalisation Score Start Residue End Residue Chromosome Location Orientation
1Myb_box5_MYB1.32022.322/ 24622-854-849Upstream regionForward
2Myb_box5_MYB1.32022.322/ 24622-316-311Upstream regionReverse
3Myb_box5_MYB1.32022.322/ 24622-859-854Upstream regionReverse
4Myb_box5_MYB1.32022.322/ 24622-49-44Upstream regionReverse
5Myb_box5_MYB1.32022.322/ 24622-47-42Upstream regionForward
6Myb_box5_MYB1.32022.322/ 24622-856-851Upstream regionReverse
7Myb_box5_MYB1.32022.322/ 24622-341-336Upstream regionForward
8Myb_box5_MYB1.32022.322/ 24622-39-34Upstream regionReverse
9Myb_box5_MYB1.32022.322/ 24622-354-349Upstream regionReverse
10Myb_box5_MYB1.32022.322/ 24622-857-852Upstream regionForward
11G_box_bHLH3.45551.412/ 24622-28-23Upstream regionForward
12DREB_AP2_EREBP3.49411.520/ 24622-80-75Upstream regionForward
13Myb_box3_MYB2.21971.024/ 24622-39-34Upstream regionReverse
14Myb_box1_MYB1.47610.571/ 24622-39-34Upstream regionReverse
15AuxRE_ARF2.90310.810/ 24622-883-878Upstream regionReverse
16N_box_bHLH3.45942.239/ 24622-979-974Upstream regionForward
17HSE1_HSF0.93910.511/ 24622-891-884Upstream regionForward


Details about the Gene : AT2G42540:

TAIR IDAT2G42540
Alternate NamesCOR15A, COLD-REGULATED 15A, COR15
Chromosome Position17719409-17719009(chr2)
Transcription FactorsMyb_box3_MYB
Myb_box1_MYB
HSE1_HSF
Myb_box5_MYB
AuxRE_ARF
DREB_AP2_EREBP
G_box_bHLH
N_box_bHLH
Experimental Data from
Microarray Database
DRASTIC-COLD, DRASTIC-DROUGHT, DRASTIC-NACL, RARGE-COLD, STRESSLINK-COLD-DROUGHT-SALT
References Elizabeth A. Bray, 2002. Annals of Botany 89:803-811


Download Sequence Data :
Click here to download AT2G42540 [1000bp + UTR] Region in Fasta format


Contact:
Prof. R. Sowdhamini [mini@ncbs.res.in]
Prof. M. Udayakumar

STIFdb Team:
Prof. R. Sowdhamini
Prof. M. Udayakumar
K. Shameer
S. Ambika
Susan Mary Varghese