STIFDB - 100bp Information | TAIR Gene ID : AT5G62050
100bp TFmap : AT5G62050
100bp TFmap Details : AT5G62050
| No: |
Transcription Factor |
Z - Score |
Normalisation Score |
Start Residue |
End Residue |
Chromosome Location |
Orientation |
|---|
| 1 | Myb_box5_MYB | 0.0813 | 0.886/ 7676 | -45 | -40 | Upstream region | Forward |
| 2 | Myb_box4_MYB | 2.2760 | 13.189/ 7676 | -75 | -69 | Upstream region | Reverse |
| 3 | AuxRE_ARF | 2.3046 | 3.666/ 7676 | 38 | 43 | 5'UTR | Reverse |
Details About the Gene : AT5G62050
| TAIR ID | AT5G62050 |
|---|
| Alternate Names | OXA1,
ATOXA1,
OXA1AT
|
|---|
| Chrosome Position | 24943639-24943407(chr5)
|
|---|
| Transcription Factors | Myb_box5_MYB
AuxRE_ARF
Myb_box4_MYB
|
|---|
Experimental Data
from Microarray Databases | RARGE-NACL
|
|---|
| References | --
|
|---|
Sequence Data - AT5G62050 [100bp + UTR] Region in Fasta format:
>AT5G62050
GATCTGGTTCGGTCCGATTTATAAACCAAACCGAACAAAATAAACCAGAACGGTTTAACT
AAAATCCCTAATTTCCCGTACGATCTGACCTTCCTTTAGTGATCTCATAACTTAGCCATT
CTAAAACCCATTCACCGTCTCTGTTTCGTTCGCCGTGATTCATAGTCGTCTCGTCTCACC
GTCACCATCACCGTCTTCTTCTTCCATTGACAGGATCTTGTTTAGATTCTGCA
Click here to download AT5G62050 [100bp + UTR] Region in Fasta format
Contact:
Prof. R. Sowdhamini [mini@ncbs.res.in]
Prof. M. Udayakumar
STIFdb Team:
Prof. R. Sowdhamini
Prof. M. Udayakumar
K. Shameer
S. Ambika
Susan Mary Varghese
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