STIFDB - 100bp Information | TAIR Gene ID : AT2G42540
100bp TFmap : AT2G42540
100bp TFmap Details : AT2G42540
| No: |
Transcription Factor |
Z - Score |
Normalisation Score |
Start Residue |
End Residue |
Chromosome Location |
Orientation |
|---|
| 1 | Myb_box5_MYB | 1.2506 | 1.139/ 7676 | -39 | -34 | Upstream region | Reverse |
| 2 | Myb_box5_MYB | 1.2506 | 1.139/ 7676 | -49 | -44 | Upstream region | Reverse |
| 3 | Myb_box5_MYB | 1.2506 | 1.139/ 7676 | -47 | -42 | Upstream region | Forward |
| 4 | G_box_bHLH | 3.4140 | 3.848/ 7676 | -28 | -23 | Upstream region | Forward |
| 5 | Myb_box1_MYB | 1.4405 | 1.862/ 7676 | -39 | -34 | Upstream region | Reverse |
| 6 | DREB_AP2_EREBP | 3.5203 | 4.422/ 7676 | -80 | -75 | Upstream region | Forward |
| 7 | Myb_box3_MYB | 2.1674 | 5.222/ 7676 | -39 | -34 | Upstream region | Reverse |
Details About the Gene : AT2G42540
| TAIR ID | AT2G42540 |
|---|
| Alternate Names | COR15A,
COLD-REGULATED 15A,
COR15
|
|---|
| Chrosome Position | 17718509-17718346(chr2)
|
|---|
| Transcription Factors | Myb_box5_MYB
DREB_AP2_EREBP
Myb_box1_MYB
G_box_bHLH
Myb_box3_MYB
|
|---|
Experimental Data
from Microarray Databases | DRASTIC-COLD, DRASTIC-DROUGHT, DRASTIC-NACL, RARGE-COLD, STRESSLINK-COLD-DROUGHT-SALT
|
|---|
| References | Elizabeth A. Bray, 2002. Annals of Botany 89:803-811
|
|---|
Sequence Data - AT2G42540 [100bp + UTR] Region in Fasta format:
>AT2G42540
AAACCCAAATTAACTTGTTGGCCGACATACATTTGTTTCTATTACAAATTTAACAACAAA
CGTCAATAAATACACGTGAAGGAAATGAGAACGACCCTCTTAAGTAGTACTGGAAATTGA
AAAAAAGAAATCTAGAAATGCTAACATGAGCTGTTCTCACTGGT
Click here to download AT2G42540 [100bp + UTR] Region in Fasta format
Contact:
Prof. R. Sowdhamini [mini@ncbs.res.in]
Prof. M. Udayakumar
STIFdb Team:
Prof. R. Sowdhamini
Prof. M. Udayakumar
K. Shameer
S. Ambika
Susan Mary Varghese
|
|
