STIFDB - 100bp Information | TAIR Gene ID : AT2G15970
STIFDB - 100bp TFmap : AT2G15970
Details of 100bp TFmap | TAIR Gene ID : AT2G15970
| No: |
Transcription Factor |
Z - Score |
Normalisation Score |
Start Residue |
End Residue |
Chromosome Location |
Orientation |
Validation |
|---|
| 1 | Myb_box5_MYB | 1.1168 | 1.111/ 70 | -78 | -73 | Upstream region | Forward | Predicted |
| 2 | Myb_box5_MYB | 1.1168 | 1.111/ 70 | -27 | -22 | Upstream region | Forward | Predicted |
| 3 | G_box1_bZIP | 4.0602 | 5.000/ 70 | -72 | -65 | Upstream region | Forward | Predicted |
| 4 | G_ABRE_bZIP | 3.6205 | 3.333/ 70 | -71 | -64 | Upstream region | Forward | Validated |
| 5 | G_box_bHLH | 3.2716 | 1.111/ 70 | -71 | -66 | Upstream region | Forward | Predicted |
| 6 | Myb_box1_MYB | 1.3017 | 3.333/ 70 | -78 | -73 | Upstream region | Forward | Predicted |
| 7 | Myb_box3_MYB | 2.0511 | 3.333/ 70 | -78 | -73 | Upstream region | Forward | Predicted |
Details about the Gene : AT2G15970 :
| TAIR ID | AT2G15970 |
|---|
| Alternate Names | COR413-PM1,
COLD ACCLIMATION PROTEIN WCOR413-LIKE PROTEIN ALPHA FORM,
ATCOR413-PM1,
FL3-5A3,
WCOR413,
WCOR413-LIKE
|
|---|
| Chromosome Position | 6957070-6957244(chr2)
|
|---|
| Transcription Factors | Myb_box5_MYB
Myb_box1_MYB
G_box_bHLH
Myb_box3_MYB
G_ABRE_bZIP
G_box1_bZIP
|
|---|
Experimental Data from
Microarray Database | DRASTIC-COLD, DRASTIC-DROUGHT, DRASTIC-NACL, RARGE-COLD, RARGE-NACL |
|---|
| References | Elizabeth A. Bray, 2002. Annals of Botany 89:803-811 |
|---|
Download Sequence Data :
Click here to download AT2G15970 [100bp + UTR] Region in Fasta format
Contact:
Prof. R. Sowdhamini [mini@ncbs.res.in]
Prof. M. Udayakumar
STIFdb Team:
Prof. R. Sowdhamini
Prof. M. Udayakumar
K. Shameer
S. Ambika
Susan Mary Varghese
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