STIFDB - 100bp Information | TAIR Gene ID : AT1G20450
STIFDB - 100bp TFmap : AT1G20450
Details of 100bp TFmap | TAIR Gene ID : AT1G20450
| No: |
Transcription Factor |
Z - Score |
Normalisation Score |
Start Residue |
End Residue |
Chromosome Location |
Orientation |
Validation |
|---|
| 1 | Myb_box5_MYB | 2.0549 | 1.667/ 70 | -52 | -47 | Upstream region | Forward | Predicted |
| 2 | Myb_box5_MYB | 2.0549 | 1.667/ 70 | 76 | 81 | 5'UTR | Forward | Predicted |
| 3 | Myb_box5_MYB | 2.0549 | 1.667/ 70 | 420 | 425 | 5'UTR | Reverse | Predicted |
| 4 | DREB_AP2_EREBP | 2.7542 | 3.750/ 70 | 220 | 225 | 5'UTR | Forward | Validated |
| 5 | DREB_AP2_EREBP | 2.7542 | 3.750/ 70 | 224 | 229 | 5'UTR | Forward | Validated |
| 6 | DREB_AP2_EREBP | 2.7542 | 3.750/ 70 | 228 | 233 | 5'UTR | Forward | Validated |
| 7 | HSE1_HSF | 0.2350 | 3.333/ 70 | 440 | 447 | 5'UTR | Forward | Predicted |
Details about the Gene : AT1G20450 :
| TAIR ID | AT1G20450 |
|---|
| Alternate Names | LTI29,
EARLY RESPONSIVE TO DEHYDRATION 10,
ER10,
ERD10,
LTI45
|
|---|
| Chromosome Position | 7088697-7088099(chr1)
|
|---|
| Transcription Factors | Myb_box5_MYB
DREB_AP2_EREBP
HSE1_HSF
|
|---|
Experimental Data from
Microarray Database | DRASTIC-COLD, DRASTIC-DROUGHT, DRASTIC-NACL, RARGE-ABA, RARGE-COLD, RARGE-DROUGHT, RARGE-NACL, STRESSLINK-COLD-DROUGHT-SALT |
|---|
| References | Elizabeth A. Bray, 2002. Annals of Botany 89:803-811 |
|---|
Download Sequence Data :
Click here to download AT1G20450 [100bp + UTR] Region in Fasta format
Contact:
Prof. R. Sowdhamini [mini@ncbs.res.in]
Prof. M. Udayakumar
STIFdb Team:
Prof. R. Sowdhamini
Prof. M. Udayakumar
K. Shameer
S. Ambika
Susan Mary Varghese
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