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STIFDB - 1000bp Information | TAIR Gene ID : AT5G44420
STIFdb - 1000bp TFmap : AT5G44420

AT5G44420_1000.png


Details of 1000bp TFmap | TAIR Gene ID : AT5G44420
No: Transcription Factor Z - Score Normalisation Score Start Residue End Residue Chromosome Location Orientation Validation
1Myb_box5_MYB2.64210.429/ 335-705-700Upstream regionReversePredicted
2Myb_box2_MYB2.59713.045/ 335-622-617Upstream regionForwardPredicted
3GCC_box_AP2_EREBP4.094915.227/ 335-262-257Upstream regionForwardValidated
4DREB_AP2_EREBP3.17082.900/ 335-264-259Upstream regionReversePredicted
5DREB_AP2_EREBP3.17082.900/ 335-221-216Upstream regionReversePredicted
6Myb_box4_MYB2.50245.374/ 335-478-472Upstream regionForwardPredicted
7Myb_box4_MYB2.50245.374/ 335-478-472Upstream regionReversePredicted
8Myb_box4_MYB2.50245.374/ 335-357-351Upstream regionForwardPredicted
9G_box2_bZIP2.02952.343/ 335-904-899Upstream regionReversePredicted
10Nac_box_NAC2.64191.523/ 335-256-251Upstream regionForwardPredicted
11HSE1_HSF-0.03650.781/ 335-145-138Upstream regionReversePredicted


Details about the Gene : AT5G44420 :

TAIR IDAT5G44420
Alternate NamesLow-molecular-weight cysteine-rich 77, LCR77, PDF1.2a, PDF1.2
Chromosome Position17924826-17924778(chr5)
Transcription FactorsG_box2_bZIP
HSE1_HSF
Myb_box5_MYB
Myb_box2_MYB
Nac_box_NAC
DREB_AP2_EREBP
GCC_box_AP2_EREBP
Myb_box4_MYB
Experimental Data from
Microarray Database
RARGE-DROUGHT
References Elizabeth A. Bray, 2002. Annals of Botany 89:803-811


Download Sequence Data :
Click here to download AT5G44420 [1000bp + UTR] Region in Fasta format


Contact:
Prof. R. Sowdhamini [mini@ncbs.res.in]
Prof. M. Udayakumar

STIFdb Team:
Prof. R. Sowdhamini
Prof. M. Udayakumar
K. Shameer
S. Ambika
Susan Mary Varghese