STIFDB - 1000bp Information | TAIR Gene ID : AT5G15970

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STIFdb - 1000bp TFmap : AT5G15970

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Details of 1000bp TFmap | TAIR Gene ID : AT5G15970

No:	Transcription Factor	Z - Score	Normalisation Score	Start Residue	End Residue	Chromosome Location	Orientation	Validation
1	Myb_box5_MYB	1.9917	1.573/ 335	-912	-907	Upstream region	Forward	Predicted
2	Myb_box5_MYB	1.9917	1.573/ 335	-718	-713	Upstream region	Forward	Predicted
3	Myb_box5_MYB	1.9917	1.573/ 335	-716	-711	Upstream region	Reverse	Predicted
4	Myb_box5_MYB	1.9917	1.573/ 335	-714	-709	Upstream region	Forward	Predicted
5	Myb_box5_MYB	1.9917	1.573/ 335	-683	-678	Upstream region	Reverse	Predicted
6	Myb_box5_MYB	1.9917	1.573/ 335	-145	-140	Upstream region	Reverse	Predicted
7	G_ABRE_bZIP	3.6983	2.659/ 335	-73	-66	Upstream region	Forward	Validated
8	G_box_bHLH	3.3693	1.861/ 335	-163	-158	Upstream region	Forward	Validated
9	G_box_bHLH	3.3693	1.861/ 335	-90	-85	Upstream region	Forward	Validated
10	G_box_bHLH	3.3693	1.861/ 335	-73	-68	Upstream region	Forward	Validated
11	DREB_AP2_EREBP	2.6990	1.772/ 335	-147	-142	Upstream region	Reverse	Validated
12	DREB_AP2_EREBP	2.6990	1.772/ 335	-131	-126	Upstream region	Forward	Validated
13	Myb_box3_MYB	2.1897	0.980/ 335	-701	-696	Upstream region	Reverse	Predicted
14	G_box1_bZIP	4.0504	2.326/ 335	-91	-84	Upstream region	Forward	Predicted
15	Myb_box1_MYB	2.1641	0.689/ 335	-683	-678	Upstream region	Reverse	Predicted
16	Myb_box4_MYB	2.6172	2.190/ 335	-766	-760	Upstream region	Forward	Predicted
17	Myb_box4_MYB	2.6172	2.190/ 335	-766	-760	Upstream region	Reverse	Predicted
18	HSE1_HSF	0.8842	0.477/ 335	-284	-277	Upstream region	Reverse	Predicted

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Details about the Gene : AT5G15970 :

TAIR ID	AT5G15970
Alternate Names	KIN2, COLD-RESPONSIVE 6.6, COR6.6
Chromosome Position	5210914-5211968(chr5)
Transcription Factors	Myb_box3_MYB Myb_box1_MYB HSE1_HSF Myb_box5_MYB DREB_AP2_EREBP G_box1_bZIP G_box_bHLH Myb_box4_MYB G_ABRE_bZIP
Experimental Data from Microarray Database	DRASTIC-COLD, DRASTIC-DROUGHT, DRASTIC-NACL, RARGE-COLD, RARGE-NACL
References	Elizabeth A. Bray, 2002. Annals of Botany 89:803-811

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Download Sequence Data :
Click here to download AT5G15970 [1000bp + UTR] Region in Fasta format

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Contact:
Prof. R. Sowdhamini [mini@ncbs.res.in]
Prof. M. Udayakumar

STIFdb Team:
Prof. R. Sowdhamini
Prof. M. Udayakumar
K. Shameer
S. Ambika
Susan Mary Varghese