STIFDB - 1000bp Information | TAIR Gene ID : AT1G20450
STIFdb - 1000bp TFmap : AT1G20450
Details of 1000bp TFmap | TAIR Gene ID : AT1G20450
| No: |
Transcription Factor |
Z - Score |
Normalisation Score |
Start Residue |
End Residue |
Chromosome Location |
Orientation |
Validation |
|---|
| 1 | Myb_box5_MYB | 2.8647 | 0.472/ 335 | -990 | -985 | Upstream region | Forward | Predicted |
| 2 | Myb_box2_MYB | 2.7383 | 3.350/ 335 | -472 | -467 | Upstream region | Reverse | Predicted |
| 3 | G_ABRE_bZIP | 3.7233 | 4.786/ 335 | -413 | -406 | Upstream region | Forward | Validated |
| 4 | G_box_bHLH | 3.4087 | 2.233/ 335 | -499 | -494 | Upstream region | Forward | Predicted |
| 5 | G_box_bHLH | 3.4087 | 2.233/ 335 | -413 | -408 | Upstream region | Forward | Predicted |
| 6 | DREB_AP2_EREBP | 3.4065 | 1.595/ 335 | -609 | -604 | Upstream region | Forward | Validated |
| 7 | Myb_box1_MYB | 2.2242 | 1.241/ 335 | -651 | -646 | Upstream region | Reverse | Predicted |
| 8 | W_box_WRKY | 1.5233 | 1.523/ 335 | -536 | -531 | Upstream region | Reverse | Predicted |
| 9 | HSE1_HSF | 0.9381 | 1.718/ 335 | -326 | -319 | Upstream region | Reverse | Predicted |
| 10 | HSE1_HSF | 0.9381 | 1.718/ 335 | -247 | -240 | Upstream region | Reverse | Predicted |
Details about the Gene : AT1G20450 :
| TAIR ID | AT1G20450 |
|---|
| Alternate Names | LTI29,
EARLY RESPONSIVE TO DEHYDRATION 10,
ER10,
ERD10,
LTI45
|
|---|
| Chromosome Position | 7089597-7089098(chr1)
|
|---|
| Transcription Factors | Myb_box1_MYB
HSE1_HSF
Myb_box5_MYB
W_box_WRKY
Myb_box2_MYB
DREB_AP2_EREBP
G_box_bHLH
G_ABRE_bZIP
|
|---|
Experimental Data from
Microarray Database | DRASTIC-COLD, DRASTIC-DROUGHT, DRASTIC-NACL, RARGE-ABA, RARGE-COLD, RARGE-DROUGHT, RARGE-NACL, STRESSLINK-COLD-DROUGHT-SALT |
|---|
| References | Elizabeth A. Bray, 2002. Annals of Botany 89:803-811 |
|---|
Download Sequence Data :
Click here to download AT1G20450 [1000bp + UTR] Region in Fasta format
Contact:
Prof. R. Sowdhamini [mini@ncbs.res.in]
Prof. M. Udayakumar
STIFdb Team:
Prof. R. Sowdhamini
Prof. M. Udayakumar
K. Shameer
S. Ambika
Susan Mary Varghese
|
|
