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Superfamily :     HSC20 (HSCB), C-terminal oligomerisation domain
Class :     All alpha proteins
Fold :     Open three-helical up-and-down bundle
Number of Members :     1
Average Size :     95


Alignment HMM

SCOP
PDBid
Start
Residue
Start
Chain
End
Residue
End
Chain
Domain
Size
Name Source Resolution R-factor
d1fpoa2 77 A 171 A 95 CHAPERONE PROTEIN HSCB ESCHERICHIA COLI 1.80 0.216

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Alignment Based On Similarities In Structural Features (COMPARER Alignment)
                              10        20        30        40        50  
 d1fpoa2  (  77 )    fdlaseqhtVrdtaFlmeqlelreeldeIeqakdearLesFikrVkkmfd
                                 aaaaaaaaaaaaaaaaaaaa  aaaaaaaaaaaaaaaa
 
                              60        70        80        90    
 d1fpoa2  ( 127 )    trhqlmveqldnetwdaAadTcrklrfLdkLrssAeqleekLldf
                     aaaaaaaaaaa   aaaaaaaaaaaaaaaaaaaaaaaaa      
 
 

Key

solvent inaccessible UPPER CASE X
solvent accesible lower case x
alpha helix red x
beta strand blue x
3 - 10 helix maroon x
hydrogen bond to main chain amide bold x
hydrogen bond to mainchain carbonyl underline x
disulphide bond cedilla ç
positive phi italic x





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Computational Approaches to Protein Science
NCBS
Bangalore, India


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PASS2 group:
Prof. R. Sowdhamini K. Kanagarajadurai P. Nagarajan S. Kalaimathy