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Superfamily :     VHP, Villin headpiece domain Class :     All alpha proteins Fold :     VHP, Villin headpiece domain Number of Members :     2 Average Size :     78

Alignment

Matrices

CUSP

HMM

Structural Motifs

SCOP PDBid	Start Residue	Start Chain	End Residue	End Chain	Domain Size	Name	Source	Resolution	R-factor
d1ujsa-	1	A	88	A	88	ACTIN-BINDING LIM PROTEIN HOMOLOGUE	HOMO SAPIENS	NA	NA
d1yu5x1	10	X	76	X	67	VILLIN	GALLUS GALLUS	1.40	0.192

| CLUSTAL | PIR | postscript | superposed-coordinates | Alistat | MeanRms | AVGSSTEQUI | Outliers | README |

Alignment Based On Similarities In Structural Features (COMPARER Alignment) 10 20 30 40 50 d1ujsa- ( 1 ) gssgssgnavnwgmreykiypyelllvttrgrnrlpkdvdrtrlerhlsq d1yu5x1 ( 10 ) pt----kletfpldvLvntaaed--LprgVdpsrkEnHLsd 3333 60 70 80 d1ujsa- ( 51 ) eefyqvfgmtisefdrlalwkrnelkkqarlfsgpssg d1yu5x1 ( 45 ) edFkavFgmtrsaFanlplwkqqnlKkekgLf aaaaaa aaaa aaaaaaaaaa

Key solvent inaccessible UPPER CASE X solvent accesible lower case x alpha helix red x beta strand blue x 3 - 10 helix maroon x hydrogen bond to main chain amide bold x hydrogen bond to mainchain carbonyl underline x disulphide bond cedilla ç positive phi italic x

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Computational Approaches to Protein Science
NCBS
Bangalore, India

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 PASS2 group: 

     Prof. R. Sowdhamini
     K. Kanagarajadurai
     P. Nagarajan
     S. Kalaimathy