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Superfamily :     Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex Class :     All alpha proteins Fold :     Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex Number of Members :     2 Average Size :     44

Alignment

Matrices

CUSP

HMM

Structural Motifs

SCOP PDBid	Start Residue	Start Chain	End Residue	End Chain	Domain Size	Name	Source	Resolution	R-factor
d1w4ha1	126	A	170	A	45	DIHYDROLIPOYLLYSINE-RESIDUE ACETYLTRANSFERASE	ESCHERICHIA COLI	NA	NA
d1w85i-	128	I	169	I	42	PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA	BACILLUS STEAROTHERMOPHILUS	2.00	0.176

| CLUSTAL | PIR | postscript | superposed-coordinates | Alistat | MeanRms | AVGSSTEQUI | Outliers | README |

Alignment Based On Similarities In Structural Features (COMPARER Alignment) 10 20 30 40 d1w4ha1 ( 126 ) qnndalspairrllaehnldasaikgtgvggrltredvekhlaka d1w85i- ( 128 ) rviAmpsvrkyArekgvdirlVqGtgkngrVlkeDIdaflag aaaaaaaaa aaaaaaaa

Key solvent inaccessible UPPER CASE X solvent accesible lower case x alpha helix red x beta strand blue x 3 - 10 helix maroon x hydrogen bond to main chain amide bold x hydrogen bond to mainchain carbonyl underline x disulphide bond cedilla ç positive phi italic x

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Computational Approaches to Protein Science
NCBS
Bangalore, India

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 PASS2 group: 

     Prof. R. Sowdhamini
     K. Kanagarajadurai
     P. Nagarajan
     S. Kalaimathy