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Streptophyta

 No of genomes            : 92
 No of superfamilies      : 65

Taxonomy       Phylum Statistics       Domain assignments       Domain architecture
Taxonomy [Help]

superkingdom      Eukaryota
kingdom      Viridiplantae
phylum      Streptophyta
Taxonomy       Phylum Statistics       Domain assignments       Domain architecture
Phylum statistics [Help]
LineageNo of members
   Class       4   
   Order       7   
   Family       12   
   Genus       38   
Taxonomy       Phylum Statistics       Domain assignments       Domain architecture


Domain assignments Download sequence in FASTA format
Taxonomy       Phylum Statistics       Domain assignments       Domain architecture
Structural Domain architecture  [help]


The bars indicate various possible structural domain architectures displayed by the superfamily members. Structural domains were identified in the proteins by running IMPALA/HMM against a database of SCOP superfamily profiles/HMM models. The SCOP superfamily code is provided for each of the structural domains
46911

46946

47060

47473

47973

49441 --- 51246

50193

50249

50249 --- 50104

50447 --- 50465

50615 --- 52540 --- 47917

51344

51735

52096

52313

52425 --- 48173

52518 --- 52922

52540

53067

53137

53807

54211

54565

54570

54814 --- 54821

54826 --- 51604

54843

54862

54966 --- 51649

55282

55608

56047

56053

56519 --- 56601

56553 --- 55257 --- 47789

56762

57840

57850

74731

   46911      Ribosomal protein S18
   46946      S13-like H2TH domain
   47060      S15/NS1 RNA-binding domain
   47473      EF-hand
   47789      C-terminal domain of RNA polymerase alpha subunit
   47917      C-terminal domain of alpha and beta subunits of F1 ATP synthase
   47973      Ribosomal protein S7
   48173      Cryptochrome/photolyase FAD-binding domain
   49441      Cytochrome f, large domain
   50104      Translation proteins SH3-like domain
   50193      Ribosomal protein L14
   50249      Nucleic acid-binding proteins
   50447      Translation proteins
   50465      EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
   50615      N-terminal domain of alpha and beta subunits of F1 ATP synthase
   51246      Rudiment single hybrid motif
   51344      Epsilon subunit of F1F0-ATP synthase N-terminal domain
   51604      Enolase C-terminal domain-like
   51649      RuBisCo, C-terminal domain
   51735      NAD(P)-binding Rossmann-fold domains
   52096      ClpP/crotonase
   52313      Ribosomal protein S2
   52425      Cryptochrome/photolyase, N-terminal domain
   52518      Thiamin diphosphate-binding fold (THDP-binding)
   52540      P-loop containing nucleotide triphosphate hydrolases
   52922      TK C-terminal domain-like
   53067      Actin-like ATPase domain
   53137      Translational machinery components
   53807      "Helical backbone" metal receptor
   54211      Ribosomal protein S5 domain 2-like
   54565      Ribosomal protein S16
   54570      Ribosomal protein S19
   54814      Prokaryotic type KH domain (pKH-domain)
   54821      Ribosomal protein S3 C-terminal domain
   54826      Enolase N-terminal domain-like
   54843      Ribosomal protein L22
   54862      4Fe-4S ferredoxins
   54966      RuBisCO, large subunit, small (N-terminal) domain
   55257      RBP11-like subunits of RNA polymerase
   55282      Ribosomal protein L5
   55608      Homing endonucleases
   56047      Ribosomal protein S8
   56053      Ribosomal protein L6
   56519      Penicillin binding protein dimerisation domain
   56553      Insert subdomain of RNA polymerase alpha subunit
   56601      beta-Lactamase/D-ala carboxypeptidase
   56762      Nickel-iron hydrogenase, large subunit
   57840      Ribosomal protein L36
   57850      RING finger domain, C3HC4
   74731      Ribosomal protein L20