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Sipuncula

 No of genomes            : 6
 No of superfamilies      : 6

Taxonomy       Phylum Statistics       Domain assignments       Domain architecture
Taxonomy [Help]

superkingdom      Eukaryota
kingdom      Metazoa
phylum      Sipuncula
Taxonomy       Phylum Statistics       Domain assignments       Domain architecture
Phylum statistics [Help]
LineageNo of members
   Class       1   
   Order       2   
   Family       3   
   Genus       5   
Taxonomy       Phylum Statistics       Domain assignments       Domain architecture


Domain assignments Download sequence in FASTA format
Taxonomy       Phylum Statistics       Domain assignments       Domain architecture
Structural Domain architecture  [help]


The bars indicate various possible structural domain architectures displayed by the superfamily members. Structural domains were identified in the proteins by running IMPALA/HMM against a database of SCOP superfamily profiles/HMM models. The SCOP superfamily code is provided for each of the structural domains
46626

46689

46785 --- 55681

47113

47188

47226 --- 47384 --- 55874 --- 50341 --- 52172

47226 --- 55874 --- 50341 --- 52172

47757 --- 53335

47852

48024 --- 52540

50331

50447 --- 50465

51419 --- 50621

51735 --- 48179

52091

52172

52172 --- 46894

52172 --- 52172

52172 --- 52738

52255

52374 --- 47323

52540

52738

53328 --- 50486

53335 --- 48452

53613

54675 --- 51690

54690 --- 53218

55040

55298

55785 --- 47384 --- 55874 --- 52172 --- 47226

55785 --- 55785 --- 55785 --- 47384 --- 55874 --- 52172

55874 --- 54211 --- 56719

55979 --- 55979 --- 55979

56235 --- 53271

56420

63882 --- 53218 --- 63867

81923 --- 52540 --- 52540

82051 --- 82051 --- 82653

   46626      Cytochrome c
   46689      Homeodomain-like
   46785      "Winged helix" DNA-binding domain
   46894      C-terminal effector domain of the bipartite response regulators
   47113      Histone-fold
   47188      Hemerythrin
   47226      Histidine-containing phosphotransfer domain, HPT domain
   47323      Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
   47384      Homodimeric domain of signal transducing histidine kinase
   47757      Chemotaxis receptor methyltransferase CheR, N-terminal domain
   47852      Hepatitis B viral capsid (hbcag)
   48024      N-terminal domain of DnaB helicase
   48179      6-phosphogluconate dehydrogenase C-terminal domain-like
   48452      TPR-like
   50331      MOP-like
   50341      CheW-like
   50447      Translation proteins
   50465      EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
   50486      FMT C-terminal domain-like
   50621      Alanine racemase-like, C-terminal domain
   51419      PLP-binding barrel
   51690      Quinolinic acid phosphoribosyltransferase, C-terminal domain
   51735      NAD(P)-binding Rossmann-fold domains
   52091      Anti-sigma factor antagonist SpoIIaa
   52172      CheY-like
   52255      N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) mutase PurE
   52374      Nucleotidylyl transferase
   52540      P-loop containing nucleotide triphosphate hydrolases
   52738      Methylesterase CheB, C-terminal domain
   53218      Molybdenum cofactor biosynthesis proteins
   53271      PRTase-like
   53328      Formyltransferase
   53335      S-adenosyl-L-methionine-dependent methyltransferases
   53613      Ribokinase-like
   54211      Ribosomal protein S5 domain 2-like
   54675      Quinolinic acid phosphoribosyltransferase, N-terminal domain
   54690      Molybdopterin synthase subunit MoaE
   55040      Molybdenum cofactor biosynthesis protein C, MoaC
   55298      YjgF-like
   55681      Class II aaRS and biotin synthetases
   55785      PYP-like sensor domain (PAS domain)
   55874      ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
   55979      DNA clamp
   56235      N-terminal nucleophile aminohydrolases (Ntn hydrolases)
   56420      Peptide deformylase
   56719      Type II DNA topoisomerase
   63867      Molybdenum cofactor biosynthesis protein MoeA, C-terminal domain
   63882      Molybdenum cofactor biosynthesis protein MoeA, N-terminal and linker domains
   81923      Double Clp-N motif
   82051      Obg GTP-binding protein N-terminal domain
   82653      Probable GTPase Der, C-terminal domain