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Echinodermata

 No of genomes            : 47
 No of superfamilies      : 143

Taxonomy       Phylum Statistics       Domain assignments       Domain architecture
Taxonomy [Help]

superkingdom      Eukaryota
kingdom      Metazoa
phylum      Echinodermata
Taxonomy       Phylum Statistics       Domain assignments       Domain architecture
Phylum statistics [Help]
LineageNo of members
   Class       5   
   Order       16   
   Family       21   
   Genus       36   
Taxonomy       Phylum Statistics       Domain assignments       Domain architecture


Domain assignments Download sequence in FASTA format
Taxonomy       Phylum Statistics       Domain assignments       Domain architecture
Structural Domain architecture  [help]


The bars indicate various possible structural domain architectures displayed by the superfamily members. Structural domains were identified in the proteins by running IMPALA/HMM against a database of SCOP superfamily profiles/HMM models. The SCOP superfamily code is provided for each of the structural domains
46458

46585 --- 49562 --- 56112

46585 --- 50156

46626

46689

46689 --- 46689

46689 --- 46689 --- 46689

46774

46785

46785 --- 69732

46966 --- 46966 --- 46966 --- 46966 --- 46966

47060 --- 52374

47090 --- 55486 --- 50923

47095

47113

47148

47170

47220 --- 47220 --- 47220 --- 47220

47240

47391 --- 51206 --- 51206

47459

47473

47473 --- 47473

47473 --- 47473 --- 47473

47576 --- 47576 --- 46966 --- 46966 --- 46966 --- 46966 --- 46966 --- 46966 --- 46966 --- 46966 --- 46966 --- 46966 --- 46966 --- 51045 --- 47473 --- 47473

47644 --- 52242

47648 --- 52418 --- 54680

47661

47769 --- 46785

47823 --- 56349

47895

47943 --- 57756 --- 57756

47954

47954 --- 47954

48034 --- 55931

48034 --- 55931 --- 48034 --- 55931 --- 48034 --- 55931

48145

48371 --- 48371

48445

48452

48503

48592 --- 52029 --- 48592

48619

49265 --- 56112

49309 --- 49309 --- 49309

49313 --- 49313 --- 49313 --- 49313 --- 49313 --- 49313 --- 49313 --- 49313 --- 49313 --- 49313 --- 49313 --- 49313 --- 57196 --- 49899 --- 49899 --- 57196

49329

49354 --- 49584

49401

49401 --- 49401

49417

49417 --- 81296 --- 48403

49562

49611 --- 49611 --- 49611 --- 50494

49723 --- 49723

49777

49785 --- 49785 --- 49785 --- 49785 --- 49785

49842

49854 --- 49854 --- 56487 --- 56487

49854 --- 57196 --- 57196 --- 57196 --- 57196 --- 57196 --- 57196 --- 57196 --- 57196 --- 57196 --- 57196 --- 57196 --- 57196 --- 57196 --- 57196 --- 57196 --- 57196 --- 57196 --- 57196 --- 50876

49899

49899 --- 63887

50044

50044 --- 50044 --- 55550 --- 56112

50044 --- 55550 --- 56112

50129 --- 51735

50156 --- 50156

50242

50249

50249 --- 50104

50405 --- 50405 --- 50405 --- 50405

50447 --- 50465

50494

50615 --- 52540 --- 47917

50630

50630 --- 46919 --- 50122

50692 --- 54585 --- 52540 --- 52540

50729 --- 56112

50814

50891

50998 --- 50998 --- 50998

51004

51011

51366

51556

51569

51695 --- 55550 --- 55550 --- 50044

51726

51735

51735 --- 48179

51735 --- 55347

51971

52080

52096 --- 51735

52218

52283

52467

52490 --- 55307

52499

52518 --- 52467 --- 52518

52540

52540 --- 50331 --- 50331

52540 --- 52540

52768

52821

52833 --- 52833 --- 52833

52968

53067

53067 --- 52121 --- 56778

53092 --- 55920

53137

53167

53300

53300 --- 69179 --- 69687

53335

53383

53448

53474

53590

53597

53613

53639

53649

53686

53686 --- 55021 --- 55021

53706 --- 50692

53720

53756

53807

53822

53822 --- 56112 --- 55073

53850 --- 53850

53850 --- 53850 --- 53850

53850 --- 54782

53901 --- 53901

54001 --- 49611 --- 49611 --- 49611 --- 50494

54236

54236 --- 47031 --- 50729 --- 48678

54236 --- 54236

54534 --- 54534 --- 48439

54593

54648

54814 --- 54821

54826 --- 51604

54928 --- 54928

54928 --- 54928 --- 54928 --- 54928

54966 --- 51649

54984

55166 --- 51294

55271 --- 53150 --- 48334 --- 52540

55307

55315

55387

55418

55455

55481 --- 53137 --- 55315

55486 --- 49854 --- 49854

55486 --- 49854 --- 49854 --- 57196

55486 --- 57552

55681

55753

55753 --- 55753 --- 55753

55770

55804

55856

55874 --- 54211

55895

55909

55945 --- 55945

56047

56112

56112 --- 56112

56176 --- 55103

56235 --- 52402

56235 --- 53697

56281 --- 55718

56425 --- 46977

56436

56436 --- 49723

56487 --- 56487 --- 56487

56487 --- 56487 --- 56487 --- 56487

56487 --- 56487 --- 56487 --- 56487 --- 56487 --- 56487 --- 56487

56487 --- 56487 --- 56487 --- 56487 --- 56487 --- 56487 --- 56487 --- 56487 --- 56487

56487 --- 56487 --- 56487 --- 56487 --- 56487 --- 56487 --- 56487 --- 57196 --- 57196

56496

56542

56601

56752

56815

56935

56983 --- 56983

57196 --- 49854 --- 57196 --- 57196 --- 57196 --- 57196 --- 57196 --- 57196 --- 57196 --- 50876

57196 --- 49854 --- 57196 --- 57196 --- 57196 --- 57196 --- 57196 --- 57196 --- 57196 --- 57196 --- 57196 --- 57196 --- 57196 --- 57196 --- 50876

57196 --- 57196 --- 57196 --- 57196 --- 57196 --- 57196 --- 57196 --- 50876

57196 --- 57196 --- 57196 --- 57196 --- 57196 --- 57196 --- 57196 --- 57196 --- 57196 --- 57196 --- 50876

57196 --- 57196 --- 57196 --- 57196 --- 57196 --- 57196 --- 57196 --- 57196 --- 57196 --- 57196 --- 57196 --- 57196 --- 57196 --- 57196 --- 57196 --- 57196

57196 --- 57196 --- 57196 --- 57196 --- 57196 --- 57196 --- 57196 --- 57196 --- 57196 --- 57196 --- 57196 --- 57196 --- 57196 --- 57196 --- 57196 --- 57196 --- 48403 --- 48403

57501

57535 --- 57535 --- 57535 --- 57535 --- 53300 --- 50494

57716 --- 48508

57716 --- 57716

57850

57889 --- 49562 --- 49562

57889 --- 57889 --- 49562 --- 56112

63501 --- 63501 --- 63501 --- 63501

64153 --- 53613

69179 --- 53300 --- 69179 --- 57196 --- 69687

69203

69318 --- 69179 --- 69179 --- 69179

69618

74853

74863 --- 52833

75516 --- 46894

82051

82051 --- 50447 --- 50465

82109

82109 --- 47473

82153

82693 --- 82714 --- 82693 --- 82693 --- 82714 --- 82693

   46458      Globin-like
   46585      Effector domain of the protein kinase pkn/prk1
   46626      Cytochrome c
   46689      Homeodomain-like
   46774      ARID-like
   46785      "Winged helix" DNA-binding domain
   46894      C-terminal effector domain of the bipartite response regulators
   46919      N-terminal Zn binding domain of HIV integrase
   46966      Spectrin repeat
   46977      Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
   47031      Second domain of FERM
   47060      S15/NS1 RNA-binding domain
   47090      PGBD-like
   47095      HMG-box
   47113      Histone-fold
   47148      Diol dehydratase, gamma subunit
   47170      Aspartate receptor, ligand-binding domain
   47220      alpha-catenin/vinculin
   47240      Ferritin-like
   47391      Dimerization-anchoring domain of cAMP-dependent type II PK regulatory subunit
   47459      Helix-loop-helix DNA-binding domain
   47473      EF-hand
   47576      Calponin-homology domain, CH-domain
   47644      Methionine synthase domain
   47648      Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
   47661      t-snare proteins
   47769      SAM/Pointed domain
   47823      lambda integrase-like, N-terminal domain
   47895      Transducin (alpha subunit), insertion domain
   47917      C-terminal domain of alpha and beta subunits of F1 ATP synthase
   47943      Retrovirus capsid protein, N-terminal core domain
   47954      Cyclin-like
   48034      Guanido kinase N-terminal domain
   48145      Influenza virus matrix protein M1
   48179      6-phosphogluconate dehydrogenase C-terminal domain-like
   48334      DNA repair protein MutS, domain III
   48371      ARM repeat
   48403      Ankyrin repeat
   48439      Protein prenylyltransferase
   48445      14-3-3 protein
   48452      TPR-like
   48503      Skp1-Skp2 dimerisation domains
   48508      Nuclear receptor ligand-binding domain
   48592      GroEL equatorial domain-like chaperone equatorial domain
   48619      Phospholipase A2, PLA2
   48678      Moesin tail domain
   49265      Fibronectin type III
   49309      Transglutaminase, two C-terminal domains
   49313      Cadherin
   49329      Cu,Zn superoxide dismutase-like
   49354      PapD-like
   49401      Bacterial adhesins
   49417      p53-like transcription factors
   49562      C2 domain (Calcium/lipid-binding domain, CaLB)
   49584      Periplasmic chaperone C-domain
   49611      Viral coat and capsid proteins
   49723      Lipase/lipooxygenase domain (PLAT/LH2 domain)
   49777      PEBP-like
   49785      Galactose-binding domain-like
   49842      TNF-like
   49854      Spermadhesin, CUB domain
   49899      Concanavalin A-like lectins/glucanases
   50044      SH3-domain
   50104      Translation proteins SH3-like domain
   50122      DNA-binding domain of retroviral integrase
   50129      GroES-like
   50156      PDZ domain-like
   50242      TIMP-like
   50249      Nucleic acid-binding proteins
   50331      MOP-like
   50405      Actin-crosslinking proteins
   50447      Translation proteins
   50465      EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
   50494      Trypsin-like serine proteases
   50615      N-terminal domain of alpha and beta subunits of F1 ATP synthase
   50630      Acid proteases
   50692      ADC-like
   50729      PH domain-like
   50814      Lipocalins
   50876      Avidin/streptavidin
   50891      Cyclophilin (peptidylprolyl isomerase)
   50923      Hemopexin-like domain
   50998      Quinoprotein alcohol dehydrogenase-like
   51004      C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
   51011      alpha-Amylases, C-terminal beta-sheet domain
   51045      WW domain
   51206      cAMP-binding domain-like
   51294      Hedgehog/intein (Hint) domain
   51366      Ribulose-phoshate binding barrel
   51556      Metallo-dependent hydrolases
   51569      Aldolase
   51604      Enolase C-terminal domain-like
   51649      RuBisCo, C-terminal domain
   51695      Phosphatidylinositol-specific phospholipase C (PI-PLC)
   51726      Uroporphyrinogen decarboxylase, UROD
   51735      NAD(P)-binding Rossmann-fold domains
   51971      Nucleotide-binding domain
   52029      GroEL apical domain-like
   52080      Ribosomal proteins L15p and L18e
   52096      ClpP/crotonase
   52121      Lumazine synthase
   52218      Flavoproteins
   52242      Cobalamin (vitamin B12)-binding domain
   52283      Formate/glycerate dehydrogenase catalytic domain-like
   52374      Nucleotidylyl transferase
   52402      Adenine nucleotide alpha hydrolases-like
   52418      Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
   52467      DHS-like NAD/FAD-binding domain
   52490      Tubulin, GTPase domain
   52499      Cysteine hydrolase
   52518      Thiamin diphosphate-binding fold (THDP-binding)
   52540      P-loop containing nucleotide triphosphate hydrolases
   52768      Arginase/deacetylase
   52821      Rhodanese/Cell cycle control phosphatase
   52833      Thioredoxin-like
   52968      B12-dependend dehydatases associated subunit
   53067      Actin-like ATPase domain
   53092      Creatinase/prolidase N-terminal domain
   53137      Translational machinery components
   53150      DNA repair protein MutS, domain II
   53167      Purine and uridine phosphorylases
   53300      vWA-like
   53335      S-adenosyl-L-methionine-dependent methyltransferases
   53383      PLP-dependent transferases
   53448      Nucleotide-diphospho-sugar transferases
   53474      alpha/beta-Hydrolases
   53590      Nucleoside hydrolase
   53597      Dihydrofolate reductases
   53613      Ribokinase-like
   53639      AraD-like aldolase/epimerase
   53649      Alkaline phosphatase-like
   53686      Tryptophan synthase beta subunit-like PLP-dependent enzymes
   53697      SIS domain
   53706      Formate dehydrogenase/DMSO reductase, domains 1-3
   53720      ALDH-like
   53756      UDP-Glycosyltransferase/glycogen phosphorylase
   53807      "Helical backbone" metal receptor
   53822      Periplasmic binding protein-like I
   53850      Periplasmic binding protein-like II
   53901      Thiolase-like
   54001      Cysteine proteinases
   54211      Ribosomal protein S5 domain 2-like
   54236      Ubiquitin-like
   54534      FKBP-like
   54585      Cdc48 domain 2-like
   54593      Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
   54648      Dynein light chain 8 (DLC8)
   54680      Pyrimidine nucleoside phosphorylase C-terminal domain
   54782      Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain
   54814      Prokaryotic type KH domain (pKH-domain)
   54821      Ribosomal protein S3 C-terminal domain
   54826      Enolase N-terminal domain-like
   54928      RNA-binding domain, RBD
   54966      RuBisCO, large subunit, small (N-terminal) domain
   54984      eEF-1beta-like
   55021      Regulatory domain in the aminoacid metabolism
   55073      Adenylyl and guanylyl cyclase catalytic domain
   55103      FAD-linked oxidases, C-terminal domain
   55166      Hedgehog/DD-pepidase
   55271      DNA repair protein MutS, domain I
   55307      Tubulin, C-terminal domain
   55315      L30e-like
   55347      Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
   55387      Frataxin-like
   55418      Translation initiation factor eIF4e
   55455      SRF-like
   55481      N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1
   55486      Metalloproteases ("zincins"), catalytic domain
   55550      SH2 domain
   55681      Class II aaRS and biotin synthetases
   55718      Sterol carrier protein, SCP
   55753      Actin depolymerizing proteins
   55770      Profilin (actin-binding protein)
   55804      Phoshotransferase/anion transport protein
   55856      Cytochrome b5
   55874      ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
   55895      Ribonuclease Rh-like
   55909      Pentein
   55920      Creatinase/aminopeptidase
   55931      Glutamine synthase/guanido kinase
   55945      TATA-box binding protein-like
   56047      Ribosomal protein S8
   56112      Protein kinase-like (PK-like)
   56176      FAD-binding domain
   56235      N-terminal nucleophile aminohydrolases (Ntn hydrolases)
   56281      Metallo-hydrolase/oxidoreductase
   56349      DNA breaking-rejoining enzymes
   56425      Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
   56436      C-type lectin-like
   56487      Scavenger receptor cysteine-rich (SRCR) domain
   56496      Fibrinogen C-terminal domain-like
   56542      Substrate-binding domain of HMG-CoA reductase
   56601      beta-Lactamase/D-ala carboxypeptidase
   56752      D-aminoacid aminotransferase-like PLP-dependent enzymes
   56778      Heat shock protein 70kD (HSP70), C-terminal substrate-binding fragment
   56815      Sec1/munc18-like (SM) proteins
   56935      Porins
   56983      Viral glycoprotein, central and dimerisation domains
   57196      EGF/Laminin
   57501      Cystine-knot cytokines
   57535      Complement control module/SCR domain
   57552      Blood coagulation inhibitor (disintegrin)
   57716      Glucocorticoid receptor-like (DNA-binding domain)
   57756      Retrovirus zinc finger-like domains
   57850      RING finger domain, C3HC4
   57889      Cysteine-rich domain
   63501      Frizzled cystein-rich domain
   63887      P-domain of calnexin/calreticulin
   64153      YjeF N-terminal domain-like
   69179      Integrin domains
   69203      Nucleoplasmin core
   69318      Integrin alpha N-terminal domain
   69618      Uroporphyrinogen III synthase (U3S, HemD)
   69687      Integrin beta tail domain
   69732      Lrp/AsnC-like transcriptional regulator C-terminal domain
   74853      Lamin A/C globular tail domain
   74863      Thiol:disulfide interchange protein DsbD, N-terminal domain
   75516      Pheromone-binding domain of LuxR-like quorum-sensing transcription factors
   81296      E set domains
   82051      Obg GTP-binding protein N-terminal domain
   82109      IP3 receptor type 1 binding core, domain 1
   82153      FAS1 domain
   82693      Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
   82714      Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains