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Basidiomycota

 No of genomes            : 107
 No of superfamilies      : 209

Taxonomy       Phylum Statistics       Domain assignments       Domain architecture
Taxonomy [Help]

superkingdom      Eukaryota
kingdom      Fungi
phylum      Basidiomycota
Taxonomy       Phylum Statistics       Domain assignments       Domain architecture
Phylum statistics [Help]
LineageNo of members
   Class       4   
   Order       14   
   Family       28   
   Genus       56   
Taxonomy       Phylum Statistics       Domain assignments       Domain architecture


Domain assignments Download sequence in FASTA format
Taxonomy       Phylum Statistics       Domain assignments       Domain architecture
Structural Domain architecture  [help]


The bars indicate various possible structural domain architectures displayed by the superfamily members. Structural domains were identified in the proteins by running IMPALA/HMM against a database of SCOP superfamily profiles/HMM models. The SCOP superfamily code is provided for each of the structural domains
46565 --- 49493 --- 49493

46609

46609 --- 54719

46626

46689

46774 --- 57903 --- 57903

47113

47473

47565

47661

47794 --- 52540

47895

47912 --- 56112

48065 --- 50729 --- 50729 --- 57903

48113

48208

48208 --- 49452

48264

48371 --- 47212

48439 --- 48452

48445

48537

48557

48576

48600

49329

49344 --- 51971

49344 --- 51971 --- 51971

49503

49503 --- 49503

49503 --- 49503 --- 49503

49611

49764

49899

49899 --- 57180

50370

50447

50447 --- 50465

50475

50630

50685

50729 --- 47912 --- 56112

50800 --- 52540

50891

50939 --- 57180

50978

51182

51206 --- 51206

51294

51344

51351

51366

51366 --- 51366

51366 --- 53686

51395

51419 --- 50621

51430

51445

51621

51621 --- 50800 --- 51621 --- 52935

51735

51735 --- 48179

51735 --- 56327

51971 --- 51971 --- 56014 --- 50022

51971 --- 54373 --- 51971

52047 --- 52047 --- 52058 --- 56295 --- 55073

52047 --- 52047 --- 56295 --- 55073

52161

52218

52218 --- 63380 --- 52343

52218 --- 63380 --- 63380 --- 52343

52279 --- 52279

52279 --- 56988 --- 52279

52317 --- 51366 --- 51366

52317 --- 56322

52440 --- 56059 --- 48108 --- 52440 --- 56059 --- 52335

52440 --- 56059 --- 51246 --- 51230

52440 --- 56059 --- 51246 --- 52255

52490

52490 --- 55307

52518 --- 52467 --- 52518

52540 --- 52540

52540 --- 54752

52768

52833

52833 --- 52833 --- 52833

52949 --- 53187

53041 --- 47807 --- 53098

53067

53067 --- 52121 --- 56778

53223 --- 51735

53271

53335

53335 --- 51735

53383

53474

53597

53613

53659

53720

53732 --- 52016

53748 --- 53748

53901 --- 53901

53933

54111 --- 51278 --- 51338 --- 51338

54160

54197 --- 54197

54236

54236 --- 54236 --- 54236 --- 54236

54236 --- 54236 --- 54236 --- 54236 --- 54236

54292 --- 46548

54292 --- 47741 --- 56176 --- 55447 --- 54665 --- 56003

54373

54534

54565

54719

54768 --- 54211

54897

54897 --- 52743

55056

55221

55298

55418

55455

55469

55545

55608 --- 55608

55729 --- 47370

55729 --- 55729

55797

55811

55831

55856 --- 51395

55895

55979 --- 55979

56014 --- 50022

56047

56112

56300

56349

56524 --- 55856 --- 55856 --- 63380 --- 52343

56601

56634 --- 52317

56741 --- 56349

56741 --- 56349 --- 56349

56849 --- 51096

57180

57180 --- 51445

57180 --- 51989

57180 --- 52279

57701

57716

57716 --- 57716

63411 --- 63411

69340

69737

81585 --- 81301

82051 --- 50447 --- 50465

   46548      alpha-helical ferredoxin
   46565      Chaperone J-domain
   46609      Fe,Mn superoxide dismutase (SOD), N-terminal domain
   46626      Cytochrome c
   46689      Homeodomain-like
   46774      ARID-like
   47113      Histone-fold
   47212      FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP)
   47370      Bromodomain
   47473      EF-hand
   47565      Insect pheromon/odorant-binding proteins
   47661      t-snare proteins
   47741      CO dehydrogenase ISP C-domain like
   47794      DNA repair protein Rad51, N-terminal domain
   47807      5' to 3' exonuclease, C-terminal subdomain
   47895      Transducin (alpha subunit), insertion domain
   47912      Wiscott-Aldrich syndrome protein, WASP, C-terminal domain
   48065      DBL homology domain (DH-domain)
   48108      Carbamoyl phosphate synthetase, large subunit connection domain
   48113      Heme-dependent peroxidases
   48179      6-phosphogluconate dehydrogenase C-terminal domain-like
   48208      Six-hairpin glycosyltransferases
   48264      Cytochrome P450
   48371      ARM repeat
   48439      Protein prenylyltransferase
   48445      14-3-3 protein
   48452      TPR-like
   48537      Phospholipase C/P1 nuclease
   48557      L-aspartase-like
   48576      Terpenoid synthases
   48600      Chorismate mutase II
   49329      Cu,Zn superoxide dismutase-like
   49344      CBD9-like
   49452      Starch-binding domain
   49493      HSP40/DnaJ peptide-binding domain
   49503      Cupredoxins
   49611      Viral coat and capsid proteins
   49764      HSP20-like chaperones
   49899      Concanavalin A-like lectins/glucanases
   50022      ISP domain
   50370      Ricin B-like lectins
   50447      Translation proteins
   50465      EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
   50475      FMN-binding split barrel
   50621      Alanine racemase-like, C-terminal domain
   50630      Acid proteases
   50685      Barwin-like endoglucanases
   50729      PH domain-like
   50800      PK beta-barrel domain-like
   50891      Cyclophilin (peptidylprolyl isomerase)
   50939      Sialidases (neuraminidases)
   50978      WD40-repeat
   51096      delta-Endotoxin (insectocide), middle domain
   51182      RmlC-like cupins
   51206      cAMP-binding domain-like
   51230      Single hybrid motif
   51246      Rudiment single hybrid motif
   51278      Urease, beta-subunit
   51294      Hedgehog/intein (Hint) domain
   51338      Composite domain of metallo-dependent hydrolases
   51344      Epsilon subunit of F1F0-ATP synthase N-terminal domain
   51351      Triosephosphate isomerase (TIM)
   51366      Ribulose-phoshate binding barrel
   51395      FMN-linked oxidoreductases
   51419      PLP-binding barrel
   51430      NAD(P)-linked oxidoreductase
   51445      (Trans)glycosidases
   51621      Phosphoenolpyruvate/pyruvate domain
   51735      NAD(P)-binding Rossmann-fold domains
   51971      Nucleotide-binding domain
   51989      Cellulases
   52016      Aconitase
   52047      RNI-like
   52058      L domain-like
   52121      Lumazine synthase
   52161      Ribosomal protein L13
   52218      Flavoproteins
   52255      N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) mutase PurE
   52279      Beta-D-glucan exohydrolase, C-terminal domain
   52317      Class I glutamine amidotransferase-like
   52335      Methylglyoxal synthase-like
   52343      Ferredoxin reductase-like, C-terminal NADP-linked domain
   52440      PreATP-grasp domain
   52467      DHS-like NAD/FAD-binding domain
   52490      Tubulin, GTPase domain
   52518      Thiamin diphosphate-binding fold (THDP-binding)
   52540      P-loop containing nucleotide triphosphate hydrolases
   52743      Subtilisin-like
   52768      Arginase/deacetylase
   52833      Thioredoxin-like
   52935      Pyruvate kinase, C-terminal domain
   52949      Leucine aminopeptidase (Aminopeptidase A), N-terminal domain
   53041      Resolvase-like
   53067      Actin-like ATPase domain
   53098      Ribonuclease H-like
   53187      Zn-dependent exopeptidases
   53223      Aminoacid dehydrogenase-like, N-terminal domain
   53271      PRTase-like
   53335      S-adenosyl-L-methionine-dependent methyltransferases
   53383      PLP-dependent transferases
   53474      alpha/beta-Hydrolases
   53597      Dihydrofolate reductases
   53613      Ribokinase-like
   53659      Isocitrate/Isopropylmalate dehydrogenases
   53686      Tryptophan synthase beta subunit-like PLP-dependent enzymes
   53720      ALDH-like
   53732      Aconitase iron-sulfur domain
   53748      Phosphoglycerate kinase
   53901      Thiolase-like
   53933      Microbial ribonucleases
   54111      Urease, gamma-subunit
   54160      Chromo domain-like
   54197      HIT-like
   54211      Ribosomal protein S5 domain 2-like
   54236      Ubiquitin-like
   54292      2Fe-2S ferredoxin-like
   54373      FAD-linked reductases, C-terminal domain
   54534      FKBP-like
   54565      Ribosomal protein S16
   54665      CO dehydrogenase molybdoprotein N-domain-like
   54719      Fe,Mn superoxide dismutase (SOD), C-terminal domain
   54752      RecA protein, C-terminal domain
   54768      dsRNA-binding domain-like
   54897      Protease propeptides/inhibitors
   55056      Killer toxin KP6 alpha-subunit
   55073      Adenylyl and guanylyl cyclase catalytic domain
   55221      Yest killer toxins
   55298      YjgF-like
   55307      Tubulin, C-terminal domain
   55418      Translation initiation factor eIF4e
   55447      CO dehydrogenase flavoprotein C-terminal domain-like
   55455      SRF-like
   55469      NADH oxidase/flavin reductase
   55545      beta-N-acetylhexosaminidase-like domain
   55608      Homing endonucleases
   55729      Acyl-CoA N-acyltransferases (Nat)
   55797      PR-1-like
   55811      Nudix
   55831      Thymidylate synthase/dCMP hydroxymethylase
   55856      Cytochrome b5
   55895      Ribonuclease Rh-like
   55979      DNA clamp
   56003      Molybdemum cofactor-binding domain
   56014      Sulfite reductase hemoprotein (SiRHP), domains 2 and 4
   56047      Ribosomal protein S8
   56059      Glutathione synthetase ATP-binding domain-like
   56112      Protein kinase-like (PK-like)
   56176      FAD-binding domain
   56295      Protein serine/threonine phosphatase 2
   56300      Metallo-dependent phosphatases
   56322      ADC synthase
   56327      Lactate & malate dehydrogenases, C-terminal domain
   56349      DNA breaking-rejoining enzymes
   56524      Sulfite oxidase, middle catalytic domain
   56601      beta-Lactamase/D-ala carboxypeptidase
   56634      Heme-linked catalases
   56741      Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment
   56778      Heat shock protein 70kD (HSP70), C-terminal substrate-binding fragment
   56849      delta-Endotoxin (insectocide), N-terminal domain
   56988      Anthrax protective antigen
   57180      Cellulose-binding domain
   57701      Zn2/Cys6 DNA-binding domain
   57716      Glucocorticoid receptor-like (DNA-binding domain)
   57903      FYVE/PHD zinc finger
   63380      Riboflavin synthase domain-like
   63411      LuxS/MPP-like metallohydrolase
   69340      C-terminal domain of adenylylcyclase associated protein
   69737      Urease metallochaperone UreE, C-terminal domain
   81301      Nucleotidyltransferase
   81585      DNA polymerase beta-like, second domain
   82051      Obg GTP-binding protein N-terminal domain