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Genome names in green represent completed genomes
Genome NameNo of Superfamily
Eacles imperialis
2
Earina autumnalis
2
Eastern equine encephalitis virus
1
Ebola virus
1
Eccoptopterus spinosus
1
Eccremocarpus scaber
2
Ecdeiocolea monostachya
5
Echeandia sp. Chase 602
2
Echimys chrysurus
2
Echinochloa crus-galli
3
Echinococcus granulosus
20
Echinococcus multilocularis
26
Echinodium umbrosum
1
Echinodorus grandiflorus
2
Echinolampas crassa
1
Echinophthirius horridus
1
Echinops bannaticus
3
Echinops exaltatus
2
Echinops telfairi
6
Echinopterys eglandulosa
2
Echinosorex gymnura
1
Echinosporangium transversale
2
Echinostoma caproni
2
Echis carinatus
4
Echis coloratus
1
Echis pyramidum
2
Echium gentianoides
1
Echium pitardii
1
Echovirus
2
Echovirus 34
1
Echovirus sp.
1
Echymipera kalubu
1
Ecnomus tenellus
2
Ectatomma tuberculatum
1
Ectinorhynchus sp. YL-1999
2
Ectocarpus siliculosus
1
Ectocarpus siliculosus virus
17
Ectocarpus variabilis
1
Ectoedemia populella
1
Ectopopterys soejartoi
2
Ectothiorhodospira shaposhnikovii
5
Ectromelia virus
20
Edge Hill virus
1
Edgeworthia chrysantha
2
EDTA-degrading bacterium BNC1
10
Edwardsiella hoshinae
1
Edwardsiella ictaluri
8
Edwardsiella sp. AC8635
1
Edwardsiella tarda
2
Efflatouniella aegyptiaca
2
Egeria densa
5
Eggplant mosaic virus
1
Ehrendorferia chrysantha
3
Ehretia anacua
2
Ehrlichia canis
6
Ehrlichia chaffeensis
13
Ehrlichia ewingii
2
Ehrlichia muris
4
Ehrlichia ruminantium
25
Ehrlichia sp.
1
Ehrlichia sp. Anan
2
Ehrlichia sp. 'China'
1
Ehrlichia sp. EHt224
2
Ehrlichia sp. ERm58
3
Ehrlichia sp. HF565
2
Ehrlichia sp. IS58
2
Ehrlichia sp. Yamaguchi
1
Eichhornia azurea
2
Eichhornia crassipes
4
Eichhornia diversifolia
2
Eichhornia heterosperma
2
Eichhornia meyeri
2
Eichhornia paniculata
2
Eichhornia paradoxa
3
Eichhornia sp.
2
Eidothea zoexylocarya
3
Eikenella corrodens
5
Eimeria acervulina
7
Eimeria bovis
4
Eimeria maxima
8
Eimeria tenella
25
Eisenia andrei
1
Eisenia arborea
2
Eisenia fetida
7
Ekebergia capensis
2
Elachista antarctica
2
Elachista fucicola
2
Elaeagnus angustifolia
3
Elaeagnus sp. Chase 2414
3
Elaeagnus umbellata
7
Elaeis guineensis
10
Elaeis oleifera
19
Elaeocarpus grandis
2
Elaeocarpus reticulatus
2
Elaeocarpus sphaericus
1
Elaphe climacophora
1
Elaphe quadrivirgata
1
Elaphe sp.
6
Elaphodus cephalophus
1
Elaphoglossum hybridum
2
Elaphoglossum yoshinagae
2
Elaphria grata
3
Elasis hirsuta
2
Elassoma evergladei
1
Elatine hydropiper
1
Elderberry latent virus
1
Electrophorus electricus
8
Eledone aldrovandi
2
Elegia asperiflora
3
Elegia cuspidata
2
Elegia sp. Chase 209
2
Eleginops maclovinus
4
Eleocharis atropurpurea
2
Eleocharis marginulata
2
Eleocharis quinqueflora
2
Eleocharis vivipara
2
Eleorchis japonica
2
Elephant herpesvirus 1
1
Elephantulus edwardii
1
Elephantulus rufescens
5
Elephas maximus
5
Elettaria cardamomum
1
Eleusine coracana
1
Eleusine indica
3
Eleutheria dichotoma
1
Eleutherine latifolia
2
Eleutherodactylus coqui
3
Eleutherodactylus cystignathoides
1
Elingamita johnsoni
2
Elleanthus sp. Chase O-374
2
Elliottia bracteata
2
Elliottia racemosa
3
Ellisomyces anomalus
1
Ellychnia corrusca
1
Elmera racemosa
2
Elminius modestus
1
Elmohardyia atlantica
1
El Moro Canyon hantavirus
1
Elm yellows phytoplasma
3
Elodea nuttallii
2
Elsholtzia stauntonii
2
Elymus californicus
3
Elymus canadensis
3
Elymus glaucescens
2
Elymus hystrix
3
Elymus patagonicus
2
Elymus repens
1
Elymus sibiricus
3
Elymus trachycaulus
2
Elytraria crenata
2
Elytrophorus globularis
2
Emballonura atrata
1
Embellisia didymospora
2
Emberiza schoeniclus
2
Emblingia calceoliflora
2
Embothrium coccineum
5
Emericella desertorum
1
Emericella nidulans
200
Emeus crassus
1
Emiliania huxleyi
3
Emmenopterys henryi
2
Emmenosperma alphitonioides
2
Emorya suaveolens
2
Empetrum nigrum
3
Empis livida
1
Empis sp. NCSU-00071973
2
Empis sp. NCSU-99060925
2
Empodisma minus
2
Empodium veratrifolium
2
Enallagma anna
1
Enallagma antennatum
1
Enallagma aspersum
1
Enallagma basidens
1
Enallagma boreale
1
Enallagma carunculatum
1
Enallagma civile
1
Enallagma clausum
1
Enallagma concisum
1
Enallagma daeckii
1
Enallagma davisi
1
Enallagma durum
1
Enallagma ebrium
1
Enallagma exsulans
1
Enallagma geminatum
1
Enallagma laterale
1
Enallagma pallidum
1
Enallagma pictum
1
Enallagma pollutum
1
Enallagma praevarum
1
Enallagma recurvatum
1
Enallagma signatum
1
Enallagma sulcatum
1
Enallagma traviatum
1
Enallagma vernale
1
Enallagma vesperum
1
Enallagma weewa
1
Encalypta armata
1
Encalypta ciliata
1
Encalypta intermedia
3
Encalypta procera
2
Encalypta rhaptocarpa
3
Encalypta streptocarpa
3
Encephalartos altensteinii
1
Encephalartos arenarius
2
Encephalartos villosus
2
Encephalitozoon cuniculi
372
Encephalitozoon hellem
3
Encephalitozoon intestinalis
4
Encephalomyocarditis virus
3
Enchenopa binotata
2
Enchytraeus buchholzi
2
Enchytraeus sp. 'Enc'
2
Encyclia sp. KMC1998
2
Endeis laevis
4
Endocladia muricata
2
Endomyces magnusii
1
Endospermum moluccanum
2
Endothia gyrosa
1
Endothia singularis
1
Endressia castellana
2
Endromis versicolora
2
Engraulis japonicus
3
Enhalus acoroides
2
Enhydra lutris
1
Enhydrina schistosa
2
Eniochobothrium gracile
1
Enkianthus campanulatus
4
Enkleia siamensis
2
Ennealophus euryandrus
3
Enneapogon scaber
2
Ensete ventricosum
5
Ensifer sp. 2FB8
1
Ensifer sp. 4FB6
1
Ensis directus
2
Entacmaea quadricolor
4
Entamoeba dispar
11
Entamoeba histolytica
86
Entamoeba invadens
5
Enterobacter aerogenes
46
Enterobacter amnigenus
6
Enterobacter asburiae
6
Enterobacter cancerogenus
1
Enterobacter cloacae
51
Enterobacter dissolvens
1
Enterobacter gergoviae
8
Enterobacter hormaechei
1
Enterobacteriaceae sp. JM965
3
Enterobacteriaceae sp. JM983
3
Enterobacteria phage 186
3
Enterobacteria phage f1
3
Enterobacteria phage fd
2
Enterobacteria phage fr
1
Enterobacteria phage G4
1
Enterobacteria phage GA
1
Enterobacteria phage HK022
6
Enterobacteria phage I2-2
1
Enterobacteria phage If1
1
Enterobacteria phage Ike
2
Enterobacteria phage JP501
1
Enterobacteria phage KU1
1
Enterobacteria phage M13
2
Enterobacteria phage Mu
6
Enterobacteria phage MX1
1
Enterobacteria phage NL95
1
Enterobacteria phage P1
9
Enterobacteria phage P2
3
Enterobacteria phage P22
8
Enterobacteria phage P7
1
Enterobacteria phage PRD1
2
Enterobacteria phage RB49
10
Enterobacteria phage RB69
4
Enterobacteria phage S13
1
Enterobacteria phage Sf6
1
Enterobacteria phage SP6
1
Enterobacteria phage T1
1
Enterobacteria phage T2
3
Enterobacteria phage T4
46
Enterobacteria phage T6
2
Enterobacteria phage T7
11
Enterobacter intermedius
6
Enterobacterio phage f2
1
Enterobacterio phage M12
1
Enterobacterio phage MS2
1
Enterobacterio phage R17
1
Enterobacter nimipressuralis
1
Enterobacter sp.
6
Enterobacter sp. 22
1
Enterococcus avium
8
Enterococcus casseliflavus
13
Enterococcus cecorum
5
Enterococcus columbae
4
Enterococcus dispar
5
Enterococcus durans
6
Enterococcus faecalis
484
Enterococcus faecium
349
Enterococcus flavescens
6
Enterococcus gallinarum
10
Enterococcus hirae
30
Enterococcus malodoratus
4
Enterococcus mundtii
6
Enterococcus pseudoavium
5
Enterococcus raffinosus
4
Enterococcus saccharolyticus
6
Enterococcus solitarius
5
Enterococcus sulfureus
4
Enterolobium contortisiliquum
1
Enterospermum coriaceum
2
Enterovirus CA54-4454
1
Enterovirus CA55-1988
2
Enterovirus CA78-1480
1
Enterovirus OMA95-6498
1
Enterovirus Stuttgart 97
1
Entisia sp.
2
Entodinium caudatum
15
Entodinium sp.
2
Entodon brevisetus
1
Entodon challengeri
2
Entodon myurus
2
Entodon rubicundus
2
Entodon scabridens
2
Entodontopsis leucostega
3
Entomophaga maimaiga
2
Entosiphon sulcatum
2
Entosphenus tridentatus
1
Entosthodon bonplandii
1
Entosthodon drummondii
1
Entosthodon laevis
1
Entransia fimbriata
4
Eosphora ehrenbergi
1
Epacris lanuginosa
2
Epacris sp.
2
Epactiochernes tumidus
3
Ephedra altissima
1
Ephedra americana
4
Ephedra andina
4
Ephedra californica
5
Ephedra distachya
3
Ephedra equisetina
5
Ephedra fragilis
2
Ephedra frustillata
5
Ephedra gerardiana
5
Ephedra intermedia
5
Ephedra major
5
Ephedra minuta
3
Ephedra monosperma
4
Ephedra sinica
4
Ephedra sp. CR08
5
Ephedra sp. CR33
6
Ephedra tweediana
4
Ephedra viridis
3
Ephemerum spinulosum
1
Ephydatia fluviatilis
24
Ephydatia muelleri
1
Epiblema scudderiana
3
Epichloe typhina
4
Epicyliosoma sp. AMcL-1999
1
Epidendrum sp. KMC1998
2
Epidinium caudatum
1
Epidinium sp.
2
Epidryos allenii
2
Epifagus virginiana
16
Epigaea repens
2
Epigeneium acuminatum
2
Epimachus albertisi
1
Epimartyria auricrinella
3
Epimedium koreanum
2
Epinephelus awoara
2
Epinephelus coioides
8
Epinephelus tauvina nervous necrosis virus
1
Epipactis helleborine
3
Epiperipatus sp. TB-2001
2
Epiphora mythimnia
5
Epiphragma fasciapenne
5
Epiphyas postvittana
3
Epiphyas postvittana nucleopolyhedrovirus
12
Epipterygium tozeri
1
Epipyxis pulchra
2
Epistephium cf. lucidum Chase O-795
2
Epistephium parviflorum
2
Epistephium sp. Chase O-432
2
Epistephium sp. Chase O-433
2
Epistephium subrepens
2
Epitedia wenmanni
1
Epizootic haematopoietic necrosis virus
1
Epizootic hemorrhagic disease virus
3
Eptatretus burgeri
15
Eptatretus cirrhatus
1
Eptatretus stoutii
5
Eptesicus fuscus
1
Eptesicus nilssoni
1
Eptesicus serotinus
1
Epulopiscium sp.
1
Epymenia capensis
2
Epymenia obtusa
2
Epymenia sp.
1
Epymenia wilsonis
2
Equid herpesvirus 2
1
Equine adenovirus A
1
Equine herpesvirus 1
13
Equine herpesvirus 2
10
Equine herpesvirus 4
20
Equine infectious anemia virus
10
Equine influenza virus
2
Equine morbillivirus
3
Equine rhinitis A virus
3
Equine rhinitis B virus
1
Equine rhinovirus 3
1
Equine rotavirus
2
Equisetum arvense
7
Equisetum bogotense
1
Equisetum sp. BW-2000
1
Equisetum telmateia
5
Equisetum x ferrissii
5
Equitius doriae
3
Equus asinus
11
Equus burchellii
4
Equus caballus
124
Equus caballus papillomavirus type 1
3
Equus grevyi
1
Equus hemionus
3
Equus przewalskii
2
Equus zebra
3
Eragrostis capensis
2
Eragrostis japonica
2
Eranthis hyemalis
2
Ercilla volubilis
5
Eremium erianthum
2
Eremocharis fruticosa
2
Eremocitrus glauca
5
Eremopyrum distans
3
Eremospatha wendlandiana
2
Eremostachys labiosa
2
Eremosyne pectinata
6
Eremothamnus marlothianus
2
Eremothecium gossypii
16
Eremurus himalaicus
2
Erethizon dorsatum
4
Ergaula capucina
1
Eriachne triodioides
2
Eria ferruginea
2
Eriaxis rigida
2
Erica sicula
3
Erinaceus concolor
3
Erinaceus europaeus
13
Eriobotrya japonica
5
Eriocaulon aquaticum
3
Eriocaulon microcephalus
2
Eriocaulon septangulare
2
Eriocheir sinensis
4
Eriochilus cucullatus
2
Eriocrania semipurpurella
2
Eriodictyon californicum
2
Eriogonum flavum
2
Eriolaena spectabilis
5
Eriophorum vaginatum
2
Eriophorum viridi-carinatum
2
Eriopsis biloba
2
Eriosorus flexuosus
1
Eriosorus hirsutulus
1
Eriosorus hirtus
1
Eriosorus hispidulus
1
Eriosorus insignis
1
Eriosorus longipetiolatus
1
Eriosorus myriophyllus
1
Eriosorus rufescens
1
Eriosorus setulosus
1
Eriosorus sp. Sanchez-Baracado 329
1
Eriospermum bayeri
5
Eriostemon brevifolius
5
Erisma floribunda
2
Eristocophis macmahonii
3
Erithalis fruticosa
5
Ernodea littoralis
2
Ernoporus caucasicus
1
Erodium texanum
2
Erodium variabile
2
Eruca sativa
1
Erucastrum abyssinicum
1
Erucastrum gallicum
1
Eruca vesicaria
1
Erwinia amylovora
34
Erwinia aphidicola
4
Erwinia chrysanthemi
76
Erwinia chrysantum
1
Erwinia mallotivora
1
Erwinia persicina
4
Erwinia psidii
1
Erwinia pyrifoliae
3
Erwinia rhapontici
5
Erwinia sp. SK-30-7
1
Erwinia tracheiphila
1
Erycibe glomerata
5
Erycibe hellwigii
5
Eryngium bourgattii
2
Erynnis tristis
2
Erysimum cheiri
1
Erysimum latent virus
1
Erysipelothrix rhusiopathiae
10
Erysiphe pisi
3
Erythrina caffra
1
Erythrina corallodendron
1
Erythrina crista-galli
3
Erythrina latissima
1
Erythrina speciosa
2
Erythrina variegata
3
Erythrobacter longus
1
Erythrobacter sp.
2
Erythrobacter sp. MBIC3960
1
Erythrocebus patas
6
Erythrocladia sp. UTEX1637
2
Erythroclonium angustatum
2
Erythroclonium muelleri
2
Erythrodermis traillii
2
Erythronium albidum
1
Erythronium japonicum
2
Erythrophleum ivorense
2
Erythrophyllum delesserioides
2
Erythrorchis altissima
2
Erythrorchis cassythoides
2
Erythrospermum phytolaccoides
2
Erythrotrichia carnea
2
Erythroxylum confusum
5
Escallonia calcottiae
5
Escallonia coquimbensis
2
Escallonia illinita
2
Escallonia myrtoidea
2
Escallonia pulverulenta
2
Escallonia resinosa
5
Escallonia rubra
5
Escallonia sp. 'Chase 2499 K'
3
Escarpia sp.
2
Escherichia blattae
2
Escherichia coli
734
Escherichia fergusonii
11
Escherichia hermannii
2
Escherichia sp. Souza-207
2
Escherichia sp. Souza-273
2
Escherichia sp. Souza-57
2
Escherichia vulneris
3
Eschrichtius robustus
6
Eschscholzia californica
10
Eschweilera odora
2
Esox lucius
5
Essigella fusca
1
Estigmene acrea
3
Ethmostigmus rubripes
1
Euastrum pectinatum
2
Eubacterium acidaminophilum
25
Eubacterium barkeri
1
Eubacterium cellulosolvens
2
Eubacterium ruminantium
2
Eubenangee virus
1
Eublepharis macularius
2
Euborellia moesta
1
Eubosmina coregoni
2
Eubrachion ambiguum
4
Eubucco bourcierii
1
Eucalliphora latifrons
1
Eucalyptus camaldulensis
3
Eucalyptus globulus
13
Eucalyptus grandis
3
Eucalyptus gunnii
4
Eucalyptus nitens
1
Eucalyptus urophylla
1
Eucamptodon muelleri
3
Eucamptodontopsis brittoniae
1
Eucelatoria armigera
1
Eucelatoria dimmocki
1
Eucharis castelnaeana
2
Eucharis grandiflora
3
Eucheuma arnoldii
2
Eucheuma denticulata
2
Eucheuma isiforme
2
Eucheuma serra
2
Eucheuma uncinatum
2
Euchresta horsfieldii
2
Euclea natalensis
5
Euclinia longiflora
2
Euclymene trinalis
1
Eucnide bartonioides
2
Eucnide lobata
2
Eucommia ulmoides
8
Eucrosia eucrosioides
2
Eucryphia cordifolia
5
Eucryphia lucida
5
Eucryphia milliganii
3
Eudorina elegans
4
Eudorina illinoisensis
2
Eudorina minodii
4
Eudorina unicocca
4
Eudromia elegans
3
Eudryas grata
3
Eudynamys scolopacea
1
Eudyptes crestatus
1
Eueides aliphera
1
Eueides isabella
1
Eueides lineata
1
Eueides lybia
1
Eueides procula
1
Eueides tales
1
Eueides vibilia
1
Eufolliculina uhligi
4
Eugeissona tristis
2
Eugenia uniflora
2
Euglena anabaena
2
Euglena geniculata
2
Euglena gracilis
73
Euglena longa
25
Euglena mutabilis
2
Euglena myxocylindracea
3
Euglena pisciformis
2
Euglena spirogyra
1
Euglena stellata
3
Euglena viridis
4
Eugymnanthea japonica
2
Eulachnus brevpilosus
1
Eulachnus rileyi
2
Eulemur fulvus
8
Eulemur macaco
2
Eulemur mongoz
2
Eulemur rubriventer
1
Eulophia nuda
2
Eulophia petersii
2
Eumeces egregius
1
Eumeces inexpectatus
2
Eumesocampa frigilis
6
Eumetopias jubatus
1
Eumorpha pandorus
3
Eumyurium sinicum
2
Eunicella cavolini
2
Eunice yamamotoi
2
Euoniticellus fulvus
1
Euoniticellus pallipes
1
Euonthophagus amyntas
1
Euonymus alatus
5
Euonymus sp. Qiu 94190
1
Eupackardia calleta
3
Eupatorium atrorubens
4
Eupera cubensis
1
Euperipatoides leuckartii
1
Euperipatoides rowelli
2
Euphilotes bernardino
2
Euphlyctis cyanophlyctis
1
Euphorbia characias
2
Euphorbia esula
24
Euphorbia lagascae
2
Euphorbia milii
1
Euphorbia polychroma
3
Euphractus sexcinctus
2
Euphranta canadensis
1
Euphrasia sp.
1
Euphronia guianensis
2
Euplassa inaequalis
3
Euplotes aediculatus
10
Euplotes eurystomus
4
Euplotes focardii
3
Euplotes minuta
1
Euplotes octocarinatus
11
Euplotes raikovi
3
Euplotes vannus
4
Eupogodon planus
2
Eupogodon spinellus
2
Eupolybothrus grossipes
1
Eupomatia bennettii
5
Euprosterna elaeasa virus
1
Euprymna scolopes
3
Euptelea pleiosperma
2
Euptelea polyandra
3
Euptilota formosissima
2
Euptoieta claudia
1
Euroglyphus maynei
6
European brown hare syndrome virus
1
European elk papillomavirus
3
Eurostopodus macrotis
1
Eurya chinensis
2
Eurya japonica
5
Euryale ferox
2
Eurya sp. Chung & Anderberg 1406
3
Eurycea sp. 'Comal Springs'
1
Eurycercus lamellatus
2
Eurychorda complanata
2
Eurydiopsis argentifera
5
Euryomyrtus ramosissima
2
Eurypelma californicum
2
Eurytemora affinis
2
Eurytides marcellus
2
Eustephia darwinii
2
Eustigmatos magna
2
Eustigmatos magnus
3
Eustoma grandiflorum
9
Eustrephus latifolius
5
Eutachyptera psidii
2
Euterpe oleracea
2
Euthyneura sp. NCSU-99071982
2
Euthystachys abbreviata
5
Eutintinnus pectinis
2
Eutrema wasabi
4
Eutrichopus gonzalezi
1
Eutricopis nexilis
3
Euwallacea validus
1
Euwallacea wallacei
1
Euwallacea xanthopus
1
Evadne nordmanni
2
Evolvulus glomeratus
5
Evolvulus nuttalianus
2
Exacum affine
5
Exanthemachrysis gayraliae
2
Exbucklandia populnea
4
Excoecaria cochinchinensis
2
Exiguobacterium sp.
3
Exiguobacterium sp. LP15
1
Exochorda giraldii
2
Exocoetus volitans
1
Exodictyon incrassatum
3
Exomala orientalis
1
Exophiala dermatitidis
4
Exorista mella
1
Exostema caribaeum
2
Exostratum blumei
3