Lactobacillus johnsonii
       
       
       
       
      
[NCBI]
    
[SCOP]     [PASS2]



 Superfamily name : Inosine monophosphate dehydrogenase (IMPDH)
 Fold name        : TIM beta/alpha-barrel
 No of Sequences  : 6
 Average size     : 215
 Diversity        : 0.121223


Taxonomy       Alignment       Dendrogram

Taxonomy     [Help]



superkingdom   
   Bacteria
phylum   
   Firmicutes
order   
   Lactobacillales
family   
   Lactobacillaceae
genus   
   Lactobacillus



Taxonomy       Alignment       Dendrogram

Alignment   [Help]


42518129    SLWETKFAKKGLTFDDVLLIPAESHVLPN-EVKLDTKLAPNLQLHIPLISAGMDTVTEGN
42518536    ---SNYFSMEAFDYDDIQLVPNKCIIKSRSEADTGVKFG-SRTFKIPVVPANMESVIDED
42519206    --------------------------HPDVVEELTKKIK--SLVKIPIYVKLTPNVTDIT
42518609    ----IALGYSSVMFDGHNLPTDENLAKTKEIVKLAHERG-------ISVEAEIGKIGEN-
42519714    -----EEGGIMPLMAKAAQEAGATGLRANSVRDIKQIKK---IVDLPMIGIIKRDYPPEK
42518373    ----EAGASAVAMHGRTRKQMYMGEADWETLKDVADALT------IPFVGNGDVTTPEKA


42518129    MAIAMAENGGLGVIHKNLSIEVQVEEVKKAKGKTVDPNLPHPAVDDQGRLLAAAAVGVTS
42518536    LAIWLAEHGYYYVMHR-FYPEKRADFIKMMH--------------DKG-LFASISVGIKD
42519206    QIAKAAENG-------------GADGLSLIN------------------TLLGMEIDVET
42518609    ---QGADGG-------------ELASVEDAK--------------------TFVAAGVDK
42519714    P--YITPTMK------------EVDELVETG-------------------VEVIAIDATL
42518373    K-AMLEDVG------------ADAVMVGREN------------------ALAAQEAGASA


42518129    DTFERAESLLEAG--ADAIVIDTAHGHSAGVLRKIKEIREHFPNATLIAGNVATGEGTAA
42518536    SEYDFIDYLAKENIIPEYTTIDVAHGHSDYVIKMIKYIKEKLPDTFLTAGNIATPEAVRE
42519206    ----R----------------KPVLGH-----------------N--IGG----------
42518609    --------------------LACGIGN--------------------IHG----------
42519714    R--------------------PRHDGKTVN--EFIKEIKTKYPNQLLMADTSNFEEAKN-
42518373    ---------------------VAMHGRTR---------------KQMYMG----------


42518129    LFDAGVDVVKVGIGPGSICTTRIVAGVGVP--QITAIYDAASVAQKYGKKIIADGGIKYS
42518536    LENAGADATKVGVGPGRACITKLKTGFGTGGWQLAALRMCSKAARKP---LIADGGIRHN
42519206    LSGEAVKPIA--IR----MVHQVRESTTLP--------------------IIGMGGISSA
42518609    VYPEGWTGLN--FDR----LKEIAEAVPNE------------------P-LVLHGGSGIP
42519714    AYEAGVDFVGTTLSG----YTEESPKTDHPDFDLIKALVDAG---LP---VIAEGKIHTP
42518373    --EADWETLK---D--------VADALTIP--------------------FVGNGDVTTP


42518129    GD-VVKALAAGGNAVMLGSMFSGTTEAPGTIFTNEGKQFKSYRGMGAVGAMSQQHGSSDR
42518536    GD-IAKSVRFGASMVMIGSLFAGHEESPGNLITIDGKRYKQYWGS-----ASEVQKGAYR
42519206    KD-VIEFILAGANAVAVGT-----------------------------------------
42518609    QDQIEKAIQLGIAKININTEF---------------------------------------
42519714    EQ-LKQVIDINPAGIVVG------------------------------------------
42518373    EKAKAMLEDVGADAVMVGR-----------------------------------------


42518129    YFQGGVNEANKLVPEGVEALVPYKGDVSNIIYQIDGGLRAGMGYVGAGTIKELIENSQFV
42518536    NVEG----------K--QMLVPYRGSIKDTLREMQEDLQSSISYAGGKDLSAIRVVDYVI
42519206    ------------------------------------------------------------
42518609    ------------------------------------------------------------
42519714    ------------------------------------------------------------
42518373    ------------------------------------------------------------


42518129    QITNAGLRESHPHDVQMAKEAPNY
42518536    VKSSI-------------------
42519206    ------------------------
42518609    ------------------------
42519714    ------------------------
42518373    ------------------------


 
 Identical
 
 Very similar 


Taxonomy       Alignment       Dendrogram


Dendrogram     [Help]