SCOP Superfamily
code | | No of
sequences | | Superfamily name |
| 46458 | | 1 | | Globin-like |
| 46548 | | 3 | | alpha-helical ferredoxin |
| 46557 | | 2 | | GreA transcript cleavage protein, N-terminal domain |
| 46565 | | 4 | | Chaperone J-domain |
| 46575 | | 1 | | Theta subunit of DNA polymerase III |
| 46589 | | 2 | | tRNA-binding arm |
| 46600 | | 2 | | C-terminal UvrC-binding domain of UvrB |
| 46604 | | 1 | | Epsilon subunit of F1F0-ATP synthase C-terminal domain |
| 46609 | | 3 | | Fe,Mn superoxide dismutase (SOD), N-terminal domain |
| 46626 | | 8 | | Cytochrome c |
| 46689 | | 27 | | Homeodomain-like |
| 46767 | | 2 | | Methylated DNA-protein cysteine methyltransferase, C-terminal domain |
| 46785 | | 46 | | "Winged helix" DNA-binding domain |
| 46894 | | 32 | | C-terminal effector domain of the bipartite response regulators |
| 46906 | | 1 | | Ribosomal protein L11, C-terminal domain |
| 46911 | | 1 | | Ribosomal protein S18 |
| 46915 | | 2 | | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
| 46929 | | 1 | | DNA helicase RuvA subunit, C-terminal domain |
| 46934 | | 1 | | UBA-like |
| 46946 | | 1 | | S13-like H2TH domain |
| 46955 | | 4 | | Putative DNA-binding domain |
| 46966 | | 1 | | Spectrin repeat |
| 46977 | | 1 | | Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain |
| 46992 | | 1 | | Ribosomal protein S20 |
| 47005 | | 3 | | Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex |
| 47060 | | 1 | | S15/NS1 RNA-binding domain |
| 47090 | | 5 | | PGBD-like |
| 47113 | | 3 | | Histone-fold |
| 47152 | | 1 | | Methane monooxygenase hydrolase, gamma subunit |
| 47175 | | 1 | | Cytochromes |
| 47188 | | 1 | | Hemerythrin |
| 47203 | | 7 | | Acyl-CoA dehydrogenase C-terminal domain-like |
| 47226 | | 4 | | Histidine-containing phosphotransfer domain, HPT domain |
| 47240 | | 8 | | Ferritin-like |
| 47266 | | 1 | | 4-helical cytokines |
| 47323 | | 5 | | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| 47336 | | 4 | | ACP-like |
| 47364 | | 57 | | Domain of the SRP/SRP receptor G-proteins |
| 47370 | | 1 | | Bromodomain |
| 47384 | | 37 | | Homodimeric domain of signal transducing histidine kinase |
| 47413 | | 22 | | lambda repressor-like DNA-binding domains |
| 47446 | | 1 | | Signal peptide-binding domain |
| 47473 | | 6 | | EF-hand |
| 47616 | | 13 | | Glutathione S-transferase (GST), C-terminal domain |
| 47644 | | 1 | | Methionine synthase domain |
| 47681 | | 1 | | C-terminal domain of B transposition protein |
| 47699 | | 1 | | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| 47729 | | 6 | | IHF-like DNA-binding proteins |
| 47741 | | 2 | | CO dehydrogenase ISP C-domain like |
| 47757 | | 2 | | Chemotaxis receptor methyltransferase CheR, N-terminal domain |
| 47781 | | 2 | | RuvA domain 2-like |
| 47789 | | 1 | | C-terminal domain of RNA polymerase alpha subunit |
| 47794 | | 1 | | DNA repair protein Rad51, N-terminal domain |
| 47807 | | 3 | | 5' to 3' exonuclease, C-terminal subdomain |
| 47823 | | 2 | | lambda integrase-like, N-terminal domain |
| 47831 | | 2 | | Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain |
| 47857 | | 2 | | Apolipophorin-III |
| 47917 | | 3 | | C-terminal domain of alpha and beta subunits of F1 ATP synthase |
| 47928 | | 2 | | N-terminal domain of the delta subunit of the F1F0-ATP synthase |
| 47954 | | 1 | | Cyclin-like |
| 47973 | | 2 | | Ribosomal protein S7 |
| 47986 | | 1 | | DEATH domain |
| 48013 | | 1 | | Antitermination factor NusB |
| 48019 | | 3 | | DNA polymerase III clamp loader subunits, C-terminal domain |
| 48024 | | 1 | | N-terminal domain of DnaB helicase |
| 48029 | | 1 | | FliG |
| 48050 | | 1 | | Hemocyanin, N-terminal domain |
| 48076 | | 1 | | LigA subunit of an aromatic-ring-opening dioxygenase LigAB |
| 48092 | | 1 | | Transcription factor STAT-4 N-domain |
| 48108 | | 1 | | Carbamoyl phosphate synthetase, large subunit connection domain |
| 48113 | | 1 | | Heme-dependent peroxidases |
| 48150 | | 4 | | DNA-glycosylase |
| 48163 | | 1 | | An anticodon-binding domain of class I aminoacyl-tRNA synthetases |
| 48168 | | 1 | | R1 subunit of ribonucleotide reductase, N-terminal domain |
| 48173 | | 1 | | Cryptochrome/photolyase FAD-binding domain |
| 48179 | | 6 | | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| 48208 | | 3 | | Six-hairpin glycosyltransferases |
| 48256 | | 2 | | Citrate synthase |
| 48264 | | 1 | | Cytochrome P450 |
| 48283 | | 12 | | FIS-like |
| 48300 | | 1 | | Ribosomal protein L7/12, oligomerisation (N-terminal) domain |
| 48317 | | 2 | | Acid phosphatase/Vanadium-dependent haloperoxidase |
| 48329 | | 2 | | RNA polymerase sigma subunit |
| 48334 | | 1 | | DNA repair protein MutS, domain III |
| 48403 | | 4 | | Ankyrin repeat |
| 48435 | | 1 | | Bacterial muramidases |
| 48452 | | 26 | | TPR-like |
| 48537 | | 1 | | Phospholipase C/P1 nuclease |
| 48557 | | 6 | | L-aspartase-like |
| 48576 | | 2 | | Terpenoid synthases |
| 48592 | | 1 | | GroEL equatorial domain-like chaperone equatorial domain |
| 48600 | | 2 | | Chorismate mutase II |
| 48613 | | 1 | | Heme oxygenase |
| 49265 | | 1 | | Fibronectin type III |
| 49319 | | 1 | | Actinoxanthin-like |
| 49329 | | 2 | | Cu,Zn superoxide dismutase-like |
| 49348 | | 1 | | Clathrin adaptor appendage domain |
| 49367 | | 1 | | Superoxide reductase-like |
| 49373 | | 1 | | Invasin/intimin cell-adhesion fragments |
| 49384 | | 1 | | Carbohydrate-binding domain |
| 49401 | | 1 | | Bacterial adhesins |
| 49410 | | 1 | | Alpha-macroglobulin receptor domain |
| 49472 | | 1 | | Transthyretin (prealbumin) |
| 49482 | | 2 | | Aromatic compound dioxygenase |
| 49493 | | 2 | | HSP40/DnaJ peptide-binding domain |
| 49503 | | 5 | | Cupredoxins |
| 49611 | | 2 | | Viral coat and capsid proteins |
| 49695 | | 2 | | gamma-Crystallin-like |
| 49764 | | 1 | | HSP20-like chaperones |
| 49777 | | 1 | | PEBP-like |
| 49785 | | 82 | | Galactose-binding domain-like |
| 49818 | | 2 | | Viral protein domain |
| 49835 | | 1 | | Virus attachment protein |
| 49899 | | 4 | | Concanavalin A-like lectins/glucanases |
| 50022 | | 7 | | ISP domain |
| 50104 | | 2 | | Translation proteins SH3-like domain |
| 50129 | | 14 | | GroES-like |
| 50156 | | 8 | | PDZ domain-like |
| 50193 | | 1 | | Ribosomal protein L14 |
| 50203 | | 1 | | Bacterial enterotoxins |
| 50249 | | 25 | | Nucleic acid-binding proteins |
| 50324 | | 1 | | Inorganic pyrophosphatase |
| 50341 | | 10 | | CheW-like |
| 50447 | | 8 | | Translation proteins |
| 50465 | | 1 | | EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain |
| 50475 | | 2 | | FMN-binding split barrel |
| 50486 | | 2 | | FMT C-terminal domain-like |
| 50494 | | 6 | | Trypsin-like serine proteases |
| 50615 | | 2 | | N-terminal domain of alpha and beta subunits of F1 ATP synthase |
| 50621 | | 2 | | Alanine racemase-like, C-terminal domain |
| 50677 | | 3 | | ValRS/IleRS/LeuRS editing domain |
| 50692 | | 2 | | ADC-like |
| 50715 | | 2 | | Ribosomal protein L25-like |
| 50723 | | 1 | | Core binding factor beta, CBF |
| 50729 | | 1 | | PH domain-like |
| 50800 | | 1 | | PK beta-barrel domain-like |
| 50814 | | 2 | | Lipocalins |
| 50891 | | 1 | | Cyclophilin (peptidylprolyl isomerase) |
| 50904 | | 1 | | Oncogene products |
| 50911 | | 1 | | Mannose 6-phosphate receptor domain |
| 50939 | | 1 | | Sialidases (neuraminidases) |
| 50952 | | 3 | | Soluble quinoprotein glucose dehydrogenase |
| 50956 | | 1 | | Thermostable phytase (3-phytase) |
| 50960 | | 13 | | TolB, C-terminal domain |
| 50969 | | 2 | | YVTN repeat-like/Quinoprotein amine dehydrogenase |
| 50993 | | 1 | | Prolyl oligopeptidase, N-terminal domain |
| 50998 | | 5 | | Quinoprotein alcohol dehydrogenase-like |
| 51011 | | 3 | | alpha-Amylases, C-terminal beta-sheet domain |
| 51055 | | 1 | | Carbohydrate binding domain |
| 51064 | | 1 | | Head domain of nucleotide exchange factor GrpE |
| 51069 | | 2 | | Carbonic anhydrase |
| 51096 | | 1 | | delta-Endotoxin (insectocide), middle domain |
| 51101 | | 1 | | Mannose-binding lectins |
| 51110 | | 1 | | alpha-D-mannose-specific plant lectins |
| 51120 | | 2 | | Serralysin-like metalloprotease, C-terminal domain |
| 51126 | | 10 | | Pectin lyase-like |
| 51161 | | 11 | | Trimeric LpxA-like enzymes |
| 51182 | | 3 | | RmlC-like cupins |
| 51197 | | 1 | | Clavaminate synthase-like |
| 51206 | | 3 | | cAMP-binding domain-like |
| 51230 | | 26 | | Single hybrid motif |
| 51246 | | 6 | | Rudiment single hybrid motif |
| 51283 | | 1 | | Deoxyuridine 5'-triphosphate nucleotidohydrolase (dUTPase) |
| 51306 | | 3 | | LexA/Signal peptidase |
| 51344 | | 1 | | Epsilon subunit of F1F0-ATP synthase N-terminal domain |
| 51351 | | 2 | | Triosephosphate isomerase (TIM) |
| 51366 | | 8 | | Ribulose-phoshate binding barrel |
| 51391 | | 2 | | Thiamin phosphate synthase |
| 51395 | | 11 | | FMN-linked oxidoreductases |
| 51412 | | 2 | | Inosine monophosphate dehydrogenase (IMPDH) |
| 51419 | | 5 | | PLP-binding barrel |
| 51430 | | 9 | | NAD(P)-linked oxidoreductase |
| 51445 | | 23 | | (Trans)glycosidases |
| 51556 | | 1 | | Metallo-dependent hydrolases |
| 51569 | | 11 | | Aldolase |
| 51604 | | 7 | | Enolase C-terminal domain-like |
| 51621 | | 6 | | Phosphoenolpyruvate/pyruvate domain |
| 51645 | | 1 | | Malate synthase G |
| 51658 | | 2 | | Xylose isomerase-like |
| 51679 | | 5 | | Bacterial luciferase-like |
| 51690 | | 1 | | Quinolinic acid phosphoribosyltransferase, C-terminal domain |
| 51713 | | 1 | | tRNA-guanine transglycosylase |
| 51717 | | 2 | | Dihydropteroate synthetase-like |
| 51726 | | 1 | | Uroporphyrinogen decarboxylase, UROD |
| 51730 | | 2 | | FAD-linked oxidoreductase |
| 51735 | | 127 | | NAD(P)-binding Rossmann-fold domains |
| 51971 | | 30 | | Nucleotide-binding domain |
| 51984 | | 1 | | MurCD N-terminal domain |
| 51998 | | 1 | | PFL-like glycyl radical enzymes |
| 52009 | | 3 | | Phosphohistidine domain |
| 52016 | | 3 | | Aconitase |
| 52021 | | 1 | | Carbamoyl phosphate synthetase, small subunit N-terminal domain |
| 52029 | | 1 | | GroEL apical domain-like |
| 52042 | | 1 | | Ribosomal protein L32e |
| 52058 | | 1 | | L domain-like |
| 52091 | | 1 | | Anti-sigma factor antagonist SpoIIaa |
| 52096 | | 13 | | ClpP/crotonase |
| 52113 | | 1 | | BRCT domain |
| 52121 | | 1 | | Lumazine synthase |
| 52141 | | 2 | | DNA glycosylase |
| 52151 | | 2 | | FabD/lysophospholipase-like |
| 52156 | | 1 | | Initiation factor IF2/eIF5b, domain 3 |
| 52161 | | 1 | | Ribosomal protein L13 |
| 52166 | | 1 | | Ribosomal protein L4 |
| 52172 | | 84 | | CheY-like |
| 52210 | | 3 | | Succinyl-CoA synthetase domains |
| 52218 | | 13 | | Flavoproteins |
| 52242 | | 2 | | Cobalamin (vitamin B12)-binding domain |
| 52255 | | 1 | | N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) mutase PurE |
| 52266 | | 5 | | Esterase/acetylhydrolase |
| 52279 | | 5 | | Beta-D-glucan exohydrolase, C-terminal domain |
| 52283 | | 4 | | Formate/glycerate dehydrogenase catalytic domain-like |
| 52304 | | 2 | | Type II 3-dehydroquinate dehydratase |
| 52313 | | 2 | | Ribosomal protein S2 |
| 52317 | | 11 | | Class I glutamine amidotransferase-like |
| 52335 | | 2 | | Methylglyoxal synthase-like |
| 52343 | | 8 | | Ferredoxin reductase-like, C-terminal NADP-linked domain |
| 52374 | | 14 | | Nucleotidylyl transferase |
| 52402 | | 12 | | Adenine nucleotide alpha hydrolases-like |
| 52413 | | 1 | | UDP-glucose dehydrogenase (UDPGDH), C-terminal (UDP-binding) domain |
| 52425 | | 1 | | Cryptochrome/photolyase, N-terminal domain |
| 52431 | | 3 | | ETFP adenine nucleotide-binding domain-like |
| 52440 | | 9 | | PreATP-grasp domain |
| 52467 | | 6 | | DHS-like NAD/FAD-binding domain |
| 52490 | | 1 | | Tubulin, GTPase domain |
| 52499 | | 2 | | Cysteine hydrolase |
| 52507 | | 1 | | DFP DNA/pantothenate metabolism flavoprotein |
| 52512 | | 1 | | Phosphosugar isomerase |
| 52518 | | 7 | | Thiamin diphosphate-binding fold (THDP-binding) |
| 52540 | | 143 | | P-loop containing nucleotide triphosphate hydrolases |
| 52733 | | 1 | | Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT) |
| 52738 | | 3 | | Methylesterase CheB, C-terminal domain |
| 52743 | | 14 | | Subtilisin-like |
| 52768 | | 3 | | Arginase/deacetylase |
| 52777 | | 3 | | CoA-dependent acyltransferases |
| 52788 | | 1 | | Phosphotyrosine protein phosphatases I |
| 52821 | | 6 | | Rhodanese/Cell cycle control phosphatase |
| 52833 | | 41 | | Thioredoxin-like |
| 52922 | | 3 | | TK C-terminal domain-like |
| 52935 | | 3 | | Pyruvate kinase, C-terminal domain |
| 52943 | | 1 | | ATP syntase (F1-ATPase), gamma subunit |
| 52954 | | 3 | | Anticodon-binding domain of Class II aaRS |
| 52964 | | 1 | | TolB, N-terminal domain |
| 52972 | | 3 | | Maf/Ham1 |
| 53041 | | 2 | | Resolvase-like |
| 53056 | | 3 | | beta-carbonic anhydrase, cab |
| 53062 | | 1 | | IIA domain of mannose transporter, IIA-Man |
| 53067 | | 6 | | Actin-like ATPase domain |
| 53092 | | 1 | | Creatinase/prolidase N-terminal domain |
| 53098 | | 2 | | Ribonuclease H-like |
| 53137 | | 1 | | Translational machinery components |
| 53150 | | 1 | | DNA repair protein MutS, domain II |
| 53155 | | 1 | | Methylated DNA-protein cysteine methyltransferase domain |
| 53167 | | 2 | | Purine and uridine phosphorylases |
| 53178 | | 1 | | Peptidyl-tRNA hydrolase |
| 53187 | | 8 | | Zn-dependent exopeptidases |
| 53213 | | 2 | | LigB subunit of an aromatic-ring-opening dioxygenase LigAB |
| 53218 | | 3 | | Molybdenum cofactor biosynthesis proteins |
| 53223 | | 2 | | Aminoacid dehydrogenase-like, N-terminal domain |
| 53244 | | 3 | | MurD-like peptide ligases, peptide-binding domain |
| 53254 | | 6 | | Phosphoglycerate mutase-like |
| 53271 | | 7 | | PRTase-like |
| 53316 | | 4 | | CoA transferase |
| 53328 | | 3 | | Formyltransferase |
| 53335 | | 68 | | S-adenosyl-L-methionine-dependent methyltransferases |
| 53383 | | 37 | | PLP-dependent transferases |
| 53448 | | 25 | | Nucleotide-diphospho-sugar transferases |
| 53474 | | 67 | | alpha/beta-Hydrolases |
| 53590 | | 3 | | Nucleoside hydrolase |
| 53597 | | 4 | | Dihydrofolate reductases |
| 53613 | | 8 | | Ribokinase-like |
| 53623 | | 7 | | MurD-like peptide ligases, catalytic domain |
| 53639 | | 3 | | AraD-like aldolase/epimerase |
| 53649 | | 1 | | Alkaline phosphatase-like |
| 53659 | | 2 | | Isocitrate/Isopropylmalate dehydrogenases |
| 53671 | | 2 | | Aspartate/ornithine carbamoyltransferase |
| 53681 | | 1 | | Aspartate/glutamate racemase |
| 53686 | | 8 | | Tryptophan synthase beta subunit-like PLP-dependent enzymes |
| 53697 | | 4 | | SIS domain |
| 53706 | | 1 | | Formate dehydrogenase/DMSO reductase, domains 1-3 |
| 53720 | | 12 | | ALDH-like |
| 53732 | | 4 | | Aconitase iron-sulfur domain |
| 53738 | | 3 | | Phosphoglucomutase, first 3 domains |
| 53748 | | 1 | | Phosphoglycerate kinase |
| 53756 | | 4 | | UDP-Glycosyltransferase/glycogen phosphorylase |
| 53774 | | 1 | | Glutaminase/Asparaginase |
| 53784 | | 1 | | Phosphofructokinase |
| 53790 | | 2 | | Cobalt precorrin-4 methyltransferase CbiF |
| 53795 | | 1 | | PEP carboxykinase-like |
| 53800 | | 2 | | Chelatase |
| 53822 | | 12 | | Periplasmic binding protein-like I |
| 53850 | | 41 | | Periplasmic binding protein-like II |
| 53901 | | 11 | | Thiolase-like |
| 53933 | | 3 | | Microbial ribonucleases |
| 53955 | | 12 | | Lysozyme-like |
| 54001 | | 1 | | Cysteine proteinases |
| 54060 | | 2 | | His-Me finger endonucleases |
| 54106 | | 5 | | LysM domain |
| 54189 | | 1 | | Ribosomal proteins L23 and L15e |
| 54197 | | 1 | | HIT-like |
| 54211 | | 9 | | Ribosomal protein S5 domain 2-like |
| 54285 | | 2 | | MoaD/ThiS |
| 54292 | | 8 | | 2Fe-2S ferredoxin-like |
| 54328 | | 1 | | Staphylokinase/streptokinase |
| 54334 | | 1 | | Superantigen toxins, C-terminal domain |
| 54364 | | 1 | | Translation initiation factor IF3, N-terminal domain |
| 54368 | | 1 | | Glutamine synthetase, N-terminal domain |
| 54373 | | 5 | | FAD-linked reductases, C-terminal domain |
| 54423 | | 1 | | Disulfide bond isomerase, DsbC, N-terminal domain |
| 54452 | | 3 | | MHC antigen-recognition domain |
| 54506 | | 1 | | Diaminopimelate epimerase |
| 54523 | | 6 | | Pilin |
| 54534 | | 11 | | FKBP-like |
| 54565 | | 1 | | Ribosomal protein S16 |
| 54570 | | 1 | | Ribosomal protein S19 |
| 54593 | | 2 | | Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |
| 54611 | | 1 | | Bacterial protein-export protein SecB |
| 54631 | | 8 | | CBS-domain |
| 54637 | | 4 | | Thioesterase/thiol ester dehydrase-isomerase |
| 54665 | | 2 | | CO dehydrogenase molybdoprotein N-domain-like |
| 54675 | | 1 | | Quinolinic acid phosphoribosyltransferase, N-terminal domain |
| 54690 | | 1 | | Molybdopterin synthase subunit MoaE |
| 54713 | | 1 | | Elongation factor Ts (EF-Ts), dimerisation domain |
| 54719 | | 2 | | Fe,Mn superoxide dismutase (SOD), C-terminal domain |
| 54736 | | 1 | | ClpS-like |
| 54742 | | 1 | | Transcription-state regulator AbrB, the N-terminal DNA recognition domain |
| 54747 | | 1 | | Ribosomal protein L11, N-terminal domain |
| 54752 | | 1 | | RecA protein, C-terminal domain |
| 54768 | | 3 | | dsRNA-binding domain-like |
| 54782 | | 1 | | Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain |
| 54791 | | 1 | | Eukaryotic type KH-domain (eKH-domain) |
| 54810 | | 1 | | GMP synthetase C-terminal dimerisation domain |
| 54814 | | 3 | | Prokaryotic type KH domain (pKH-domain) |
| 54821 | | 1 | | Ribosomal protein S3 C-terminal domain |
| 54826 | | 4 | | Enolase N-terminal domain-like |
| 54843 | | 1 | | Ribosomal protein L22 |
| 54849 | | 2 | | GroEL-intermediate domain like |
| 54862 | | 7 | | 4Fe-4S ferredoxins |
| 54897 | | 2 | | Protease propeptides/inhibitors |
| 54913 | | 2 | | GlnB-like |
| 54919 | | 1 | | Nucleoside diphosphate kinases |
| 54957 | | 1 | | Viral DNA-binding domain |
| 54975 | | 1 | | Acylphosphatase-like |
| 54980 | | 4 | | EF-G/eEF-2 domains III and V |
| 54991 | | 1 | | Anticodon-binding domain of PheRS |
| 54995 | | 1 | | Ribosomal protein S6 |
| 54999 | | 1 | | Ribosomal protein S10 |
| 55021 | | 4 | | Regulatory domain in the aminoacid metabolism |
| 55040 | | 1 | | Molybdenum cofactor biosynthesis protein C, MoaC |
| 55048 | | 1 | | Probable ACP-binding domain of malonyl-CoA ACP transacylase |
| 55060 | | 1 | | GHMP Kinase |
| 55068 | | 1 | | Peptide methionine sulfoxide reductase |
| 55083 | | 2 | | 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK |
| 55120 | | 3 | | Pseudouridine synthase |
| 55124 | | 1 | | Sulfite reductase, domains 1 and 3 |
| 55129 | | 1 | | Ribosomal protein L30p/L7e |
| 55174 | | 5 | | Alpha-L RNA-binding motif |
| 55186 | | 2 | | Threonyl-tRNA synthetase (ThrRS), second 'additional' domain |
| 55194 | | 1 | | Ribosome recycling factor, RRF |
| 55200 | | 1 | | Translation initiation factor IF3, C-terminal domain |
| 55205 | | 4 | | EPT/RTPC-like |
| 55229 | | 1 | | Cell division protein MinE topological specificity domain |
| 55248 | | 2 | | Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) |
| 55257 | | 1 | | RBP11-like subunits of RNA polymerase |
| 55261 | | 2 | | Prokaryotic AspRS, insert domain |
| 55271 | | 1 | | DNA repair protein MutS, domain I |
| 55282 | | 1 | | Ribosomal protein L5 |
| 55298 | | 5 | | YjgF-like |
| 55307 | | 1 | | Tubulin, C-terminal domain |
| 55315 | | 1 | | L30e-like |
| 55326 | | 1 | | Aminoimidazole ribonucleotide synthetase (PurM) N-terminal domain |
| 55347 | | 3 | | Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain |
| 55405 | | 1 | | RNA bacteriophage capsid protein |
| 55424 | | 4 | | FAD/NAD-linked reductases, dimerisation (C-terminal) domain |
| 55447 | | 3 | | CO dehydrogenase flavoprotein C-terminal domain-like |
| 55469 | | 1 | | NADH oxidase/flavin reductase |
| 55545 | | 2 | | beta-N-acetylhexosaminidase-like domain |
| 55550 | | 1 | | SH2 domain |
| 55594 | | 3 | | HPr-like |
| 55620 | | 3 | | Tetrahydrobiopterin biosynthesis enzymes-like |
| 55653 | | 1 | | Ribosomal protein L9 C-domain |
| 55658 | | 1 | | L9 N-domain-like |
| 55666 | | 1 | | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domains 2 and 5 |
| 55681 | | 13 | | Class II aaRS and biotin synthetases |
| 55729 | | 3 | | Acyl-CoA N-acyltransferases (Nat) |
| 55753 | | 2 | | Actin depolymerizing proteins |
| 55770 | | 1 | | Profilin (actin-binding protein) |
| 55781 | | 1 | | GAF domain-like |
| 55785 | | 27 | | PYP-like sensor domain (PAS domain) |
| 55804 | | 2 | | Phoshotransferase/anion transport protein |
| 55811 | | 12 | | Nudix |
| 55821 | | 2 | | YrdC/RibB |
| 55826 | | 1 | | Hypothetical protein HI1434 (YbaK homologue) |
| 55831 | | 1 | | Thymidylate synthase/dCMP hydroxymethylase |
| 55874 | | 69 | | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |
| 55920 | | 5 | | Creatinase/aminopeptidase |
| 55931 | | 3 | | Glutamine synthase/guanido kinase |
| 55945 | | 1 | | TATA-box binding protein-like |
| 55961 | | 1 | | Bet v1-like |
| 55973 | | 1 | | S-adenosylmethionine synthetase |
| 55979 | | 1 | | DNA clamp |
| 56003 | | 2 | | Molybdemum cofactor-binding domain |
| 56014 | | 2 | | Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 |
| 56024 | | 5 | | Phospholipase D/nuclease |
| 56037 | | 1 | | B3/B4 domain of PheRS, PheT |
| 56042 | | 1 | | Aminoimidazole ribonucleotide synthetase (PurM) C-terminal domain |
| 56047 | | 1 | | Ribosomal protein S8 |
| 56053 | | 2 | | Ribosomal protein L6 |
| 56059 | | 13 | | Glutathione synthetase ATP-binding domain-like |
| 56091 | | 1 | | DNA ligase/mRNA capping enzyme, catalytic domain |
| 56104 | | 1 | | SAICAR synthase-like |
| 56112 | | 13 | | Protein kinase-like (PK-like) |
| 56176 | | 54 | | FAD-binding domain |
| 56194 | | 1 | | Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain |
| 56214 | | 1 | | 4'-phosphopantetheinyl transferase |
| 56219 | | 4 | | DNase I-like |
| 56235 | | 8 | | N-terminal nucleophile aminohydrolases (Ntn hydrolases) |
| 56281 | | 7 | | Metallo-hydrolase/oxidoreductase |
| 56317 | | 4 | | Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase |
| 56322 | | 2 | | ADC synthase |
| 56327 | | 1 | | Lactate & malate dehydrogenases, C-terminal domain |
| 56349 | | 16 | | DNA breaking-rejoining enzymes |
| 56420 | | 2 | | Peptide deformylase |
| 56425 | | 1 | | Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain |
| 56436 | | 2 | | C-type lectin-like |
| 56507 | | 1 | | Methionine synthase activation domain-like |
| 56529 | | 4 | | FAH |
| 56534 | | 1 | | Aromatic aminoacid monoxygenases, catalytic and oligomerization domains |
| 56553 | | 1 | | Insert subdomain of RNA polymerase alpha subunit |
| 56601 | | 13 | | beta-Lactamase/D-ala carboxypeptidase |
| 56634 | | 3 | | Heme-linked catalases |
| 56645 | | 8 | | Acyl-CoA dehydrogenase NM domain-like |
| 56655 | | 3 | | Sugar phosphatases |
| 56712 | | 2 | | Prokaryotic type I DNA topoisomerase |
| 56719 | | 2 | | Type II DNA topoisomerase |
| 56731 | | 1 | | DNA primase DnaG catalytic core |
| 56736 | | 2 | | DNA repair protein MutM (Fpg) |
| 56752 | | 3 | | D-aminoacid aminotransferase-like PLP-dependent enzymes |
| 56778 | | 1 | | Heat shock protein 70kD (HSP70), C-terminal substrate-binding fragment |
| 56784 | | 15 | | HAD-like |
| 56796 | | 1 | | Dehydroquinate synthase-like |
| 56801 | | 8 | | Firefly luciferase-like |
| 56808 | | 1 | | Ribosomal protein L1 |
| 56854 | | 1 | | Bcl-2 inhibitors of programmed cell death |
| 56864 | | 1 | | Exotoxin A, middle domain |
| 56925 | | 2 | | OMPA-like |
| 56931 | | 1 | | Outer membrane phospholipase A (OMPLA) |
| 56935 | | 76 | | Porins |
| 56954 | | 12 | | Integral outer membrane protein TolC, efflux pump component |
| 57362 | | 1 | | BPTI-like |
| 57716 | | 1 | | Glucocorticoid receptor-like (DNA-binding domain) |
| 57770 | | 1 | | Methionyl-tRNA synthetase (MetRS), Zn-domain |
| 57802 | | 1 | | Rubredoxin-like |
| 57829 | | 3 | | Zn-binding ribosomal proteins |
| 57884 | | 1 | | Ada DNA repair protein, N-terminal domain (N-Ada 10) |
| 57924 | | 1 | | Inhibitor of apoptosis (IAP) repeat |
| 57938 | | 1 | | Cysteine-rich domain of the chaperone protein DnaJ. |
| 63380 | | 7 | | Riboflavin synthase domain-like |
| 63411 | | 1 | | LuxS/MPP-like metallohydrolase |
| 63418 | | 2 | | MurE/MurF N-terminal domain |
| 63570 | | 1 | | PABC (PABP) domain |
| 63737 | | 3 | | Leukotriene A4 hydrolase N-terminal domain |
| 63829 | | 15 | | Diisopropylfluorophosphatase (phosphotriesterase, DFP) |
| 63848 | | 1 | | Cell-division inhibitor MinC, C-terminal domain |
| 63867 | | 1 | | Molybdenum cofactor biosynthesis protein MoeA, C-terminal domain |
| 63882 | | 2 | | Molybdenum cofactor biosynthesis protein MoeA, N-terminal and linker domains |
| 63892 | | 1 | | Pyridoxine 5'-phosphate synthase |
| 64005 | | 1 | | Undecaprenyl diphosphate synthase |
| 64043 | | 1 | | Cell-division inhibitor MinC, N-terminal domain |
| 64153 | | 1 | | YjeF N-terminal domain-like |
| 64167 | | 1 | | SurE-like |
| 64197 | | 1 | | AICAR transformylase domain of bifunctional purine biosynthesis enzyme ATIC |
| 64263 | | 1 | | Prokaryotic ribosomal protein L17 |
| 64288 | | 1 | | Chorismate lyase |
| 64325 | | 8 | | Dimeric C-terminal domain of membrane protein TonB |
| 64383 | | 1 | | Cell-division protein ZipA, C-terminal domain |
| 64397 | | 1 | | Hsp33 domain |
| 64496 | | 1 | | DNA-binding domain of intron endonuclease I-TevI |
| 68912 | | 1 | | Rho termination factor, N-terminal domain |
| 68923 | | 1 | | PEP carboxykinase N-terminal domain |
| 68930 | | 1 | | Protein-L-isoaspartyl O-methyltransferase, C-terminal domain |
| 69047 | | 2 | | Hypothetical protein YjbJ |
| 69055 | | 1 | | 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain |
| 69065 | | 1 | | RNase III endonuclease catalytic domain |
| 69189 | | 1 | | Penicillin-binding protein 5, C-terminal domain |
| 69287 | | 1 | | Urease metallochaperone UreE, N-terminal domain |
| 69336 | | 1 | | Alpha subunit of glutamate synthase, C-terminal domain |
| 69500 | | 1 | | D-Tyr tRNAtyr deacylase |
| 69572 | | 3 | | Molybdenum cofactor biosynthesis protein MoeB |
| 69705 | | 1 | | Transcription factor NusA, N-terminal domain |
| 69732 | | 1 | | Lrp/AsnC-like transcriptional regulator C-terminal domain |
| 69742 | | 1 | | Glutamyl tRNA-reductase catalytic, N-terminal domain |
| 69754 | | 1 | | Ribosome binding protein Y (YfiA homologue) |
| 69765 | | 1 | | 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF |
| 69848 | | 1 | | LCCL domain |
| 69864 | | 1 | | Argininosuccinate synthetase, C-terminal domain |
| 74650 | | 1 | | Galactose mutarotase-like |
| 74731 | | 1 | | Ribosomal protein L20 |
| 74778 | | 1 | | Aconitase B, N-terminal domain |
| 74863 | | 1 | | Thiol:disulfide interchange protein DsbD, N-terminal domain |
| 74942 | | 1 | | YhbC-like, C-terminal domain |
| 74982 | | 1 | | Small protein B (SmpB) |
| 75005 | | 6 | | alpha-L-arabinanase |
| 75138 | | 1 | | HPr kinase/phoshatase HprK N-terminal domain |
| 75217 | | 5 | | alpha/beta knot |
| 75304 | | 3 | | Amidase signature (AS) enzymes |
| 75420 | | 1 | | YhbC-like, N-terminal domain |
| 75445 | | 1 | | D-ribose-5-phosphate isomerase (RpiA), lid domain |
| 75471 | | 2 | | YhbY-like |
| 75620 | | 2 | | Polypeptide chain release factor 2 (RF2) |
| 75625 | | 1 | | YebC-like |
| 75708 | | 1 | | Chemotaxis phosphatase CheZ |
| 75712 | | 1 | | Rad50 coiled-coil Zn hook |
| 81271 | | 3 | | TGS-like |
| 81273 | | 1 | | H-NS histone-like proteins |
| 81296 | | 8 | | E set domains |
| 81624 | | 2 | | N-terminal domain of MutM-like DNA repair proteins |
| 81767 | | 14 | | Pre-protein croslinking domain of SecA |
| 81799 | | 1 | | Putative methyltransferase TM0872, insert domain |
| 81827 | | 1 | | Porin chaperone SurA, peptide-binding domain |
| 81886 | | 1 | | Helical scaffold and wing domains of SecA |
| 81923 | | 2 | | Double Clp-N motif |
| 81935 | | 1 | | N-terminal domain of bifunctional PutA protein |
| 81982 | | 1 | | Antigen MPT63/MPB63 (immunoprotective extracellular protein) |
| 81986 | | 1 | | Tp47 lipoprotein, middle and C-terminal domains |
| 82026 | | 2 | | Fucose-binding lectin II (PA-IIL) |
| 82051 | | 16 | | Obg GTP-binding protein N-terminal domain |
| 82093 | | 2 | | Heme chaperone CcmE |
| 82114 | | 1 | | Riboflavin kinase |
| 82153 | | 1 | | FAS1 domain |
| 82171 | | 14 | | Dipeptidyl peptidase IV/CD26, N-terminal domain |
| 82199 | | 1 | | SET domain |
| 82282 | | 2 | | Betaine-homocysteine S-methyltransferase |
| 82549 | | 1 | | DegV-like |
| 82607 | | 1 | | YbaB-like |
| 82649 | | 1 | | SufE (YhnA) |
| 82657 | | 3 | | BolA-like |
| 82679 | | 1 | | N-utilization substance G protein NusG, N-terminal domain |
| 82689 | | 2 | | Mechanosensitive channel protein MscS (YggB), C-terminal domain |
| 82693 | | 15 | | Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains |
| 82714 | | 13 | | Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains |
| 82784 | | 2 | | Ohr/OsmC resistance proteins |
| 82829 | | 1 | | Putative cell cycle protein MesJ, middle and C-terminal domain |
