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Protein Alignments organised as Structural Superfamilies


Superfamily :     Tumor suppressor gene product Apc
Class :    Coiled coil proteins
Fold :    Antiparallel coiled-coil
Number of Members :     1
Average Size :     105


Alignment Genome Distribution HMM Interacting Motifs

Protein
Code		 Start
Residue		 Start
Chain		 End
Residue		 End
Chain		 Domain
Size		 Name Source Resolution R-factor
1m5ia- 130 A 239 A 105 apc protein homo sapiens 2.00 0.257

| pir | postscript | superposed-coordinates |

Alignment Based On Similarities In Structural Features (COMPARER Alignment) 



 
1m5ia-  ( 130 )    stgyLeeLekersllladldkeekekdwyyaqlqnltkridslp slqtd
                     aaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa      aaaa
 


    
1m5ia-  ( 184 )    mtrrqLeyearqirvameeqLgtcqdmekraqrriariqqIekdilrirq
                   aaaaaaaaaaaaaaaaaaaaa   aaaaaaaaaaaaaaaaaaaaaaaaaa
 


    
1m5ia-  ( 234 )    llqsqa
                   aaaaa 
 


    
 


Key
solvent inaccessible                    UPPER CASE      X
solvent accesible                       lower case      x
alpha helix                             red             x
beta strand				blue            x
3 - 10 helix				maroon          x
hydrogen bond to main chain amide    	bold            x
hydrogen bond to mainchain carbonyl     underline	x
disulphide bond                         cedilla         ç
positive phi				italic		x


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