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Protein Alignments organised as Structural Superfamilies


Superfamily :     GIY-YIG endonuclease
Class :    Alpha and beta proteins (a+b)
Fold :    GIY-YIG endonuclease
Number of Members :     1
Average Size :     97


Alignment Genome Distribution HMM Interacting Motifs

Protein
Code		 Start
Residue		 Start
Chain		 End
Residue		 End
Chain		 Domain
Size		 Name Source Resolution R-factor
1mk0a- 1 A 97 A 97 intron-associated endonuclease 1 bacteriophage t4 1.60 0.197

| pir | postscript | superposed-coordinates |

Alignment Based On Similarities In Structural Features (COMPARER Alignment) 



 
1mk0a-  (   1 )    mksGIYqIkNtlnnkvyVgsAkdFekrwkrHfkdLekgcHsSikLqrsfn
                      bbbbbbb     bbbbbb  aaaaaaaaaaaaaa     aaaaaaaa
 


    
1mk0a-  (  51 )    khgnvFecsileeipyekdlIierAnfwIkelnSkinGYniadatfg
                   aa   bbbbbbbb    aaaaaaaaaaaaaa                
 


    
 


Key
solvent inaccessible                    UPPER CASE      X
solvent accesible                       lower case      x
alpha helix                             red             x
beta strand				blue            x
3 - 10 helix				maroon          x
hydrogen bond to main chain amide    	bold            x
hydrogen bond to mainchain carbonyl     underline	x
disulphide bond                         cedilla         ç
positive phi				italic		x


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