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Protein Alignments organised as Structural Superfamilies |
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| Alignment | Genome Distribution | HMM | Interacting Motifs |
| Protein Code |
Start Residue |
Start Chain |
End Residue |
End Chain |
Domain Size |
Name | Source | Resolution | R-factor |
|---|---|---|---|---|---|---|---|---|---|
| 1ek9a- | 1 | A | 428 | A | 423 | outer membrane protein tolc | escherichia coli | 2.10 | 0.208 |
| pir | postscript | superposed-coordinates |
Alignment Based On Similarities In Structural Features (COMPARER Alignment)
1ek9a- ( 1 ) enLqVYqqArlsNpelrksaadrdaafekinearspllpqlglgadytys
aaaaaaaa aaaaaaaaaaaaaaaaaaaaa333 bbbbbbbbbbb
1ek9a- ( 52 ) ngyrdanginsnatsaslqltqSifd skwraltlqekaAgiqdVtyqtd
b bbbbbbbbbbbbbbbb aaaaaaaaaaaaaaaaaaaaaa
1ek9a- ( 102 ) qqtLIlnTAtaYFnVLnaidvLsyTqaqkeaIyrqLdqTtqrfnvglvai
aaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa a
1ek9a- ( 152 ) tdvqnAraqydtVlaneltarnnLdnaveqLrqiTgnyypeLAaLnvenf
aaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa bbbbb
1ek9a- ( 202 ) ktdkpqpvnallkeAekrnlsLlqarlsqdlAreqirqaqDghlptldlt
aaaaaaaaaaa aaaaaaaaaaaaaaaaaaaaa333 bbbbb
1ek9a- ( 252 ) astgisdtsysgsktrgaagtqyddsn gqnkvglsfslpiyqgg vnsq
bbbbbb bbb bbbbbbbbb aa
1ek9a- ( 302 ) vkqaqynfvgaseqlesahrsVvqtVrsSfnnInasissInaykqavvsa
aaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa
1ek9a- ( 352 ) qssldaeagysvgtrtIvdVLdaTttLynakqelAnarYnYlinqLniks
aaaaa aaaa aaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa
1ek9a- ( 403 ) alGtLneqdllalnnaLskpvsTnpe
aa aaaaaaaaa bbbbbb
Key
solvent inaccessible UPPER CASE X
solvent accesible lower case x
alpha helix red x
beta strand blue x
3 - 10 helix maroon x
hydrogen bond to main chain amide bold x
hydrogen bond to mainchain carbonyl underline x
disulphide bond cedilla ç
positive phi italic x