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Protein Alignments organised as Structural Superfamilies |
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| Alignment | Matrices | Tree | Genome Distribution | HMM | Interacting Motifs |
| Protein Code |
Start Residue |
Start Chain |
End Residue |
End Chain |
Domain Size |
Name | Source | Resolution | R-factor |
|---|---|---|---|---|---|---|---|---|---|
| 1f7la- | 1 | A | 118 | A | 118 | holo-(acyl carrier protein) synthase | bacillus subtilis | 1.50 | 0.185 |
| 1qr0a1 | 1 | A | 101 | A | 101 | 4'-phosphopantetheinyl transferase sfp | bacillus subtilis | 1.90 | 0.216 |
| 1qr0a2 | 102 | A | 228 | A | 127 | 4'-phosphopantetheinyl transferase sfp | bacillus subtilis | 1.90 | 0.216 |
| pir | postscript | superposed-coordinates |
Alignment Based On Similarities In Structural Features (COMPARER Alignment)
1f7la- ( 1 ) giygigldiTelkrIasmagrqkrFaerILtrsEldqyyels-ekrknef
1qr0a1 ( 1 ) mkiygiyMdr--plsqeenerfmtfIspekrekCrrfyhkedahrt
1qr0a2 ( 102 ) qpigidiektk---pi---sleiAkrfFskteysdLlakd-kdeqtdy
bbbbbb aa aaaaaaa aaaaaaa
1f7la- ( 50 ) LAGrFAAKeAFSkAfgtgigrqLsfqdIeIrkdqngkpyIiCtklspaaV
1qr0a1 ( 45 ) LlGdvlVRsVISrqyq------ldksdIrfstqeygkpcI--pdlpdAhF
1qr0a2 ( 143 ) FYhlwSmkeSfikQegkglslpl--dsfsvrlhqdgqvsielpds-hspc
aaaaaaaaaaaaaa bb bb
1f7la- ( 100 ) hVsith-tkeyAaAqVvIer
1qr0a1 ( 87 ) nishs---grwViGaFds
1qr0a2 ( 190 ) yiktyevdpgykmAvCaahpdfpeditmvsyeellraaa
bbbbb bbbbbbb
Key
solvent inaccessible UPPER CASE X
solvent accesible lower case x
alpha helix red x
beta strand blue x
3 - 10 helix maroon x
hydrogen bond to main chain amide bold x
hydrogen bond to mainchain carbonyl underline x
disulphide bond cedilla ç
positive phi italic x