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Protein Alignments organised as Structural Superfamilies


Superfamily :     Alpha-lytic protease prodomain
Class :    Alpha and beta proteins (a+b)
Fold :    Alpha-lytic protease prodomain-like
Number of Members :     2
Average Size :     75


Alignment Genome Distribution HMM Interacting Motifs

Protein
Code		 Start
Residue		 Start
Chain		 End
Residue		 End
Chain		 Domain
Size		 Name Source Resolution R-factor
3proc1 6 C 85 C 80 alpha-lytic protease lysobacter enzymogenes 1.80 0.207
3proc2 86 C 163 C 70 alpha-lytic protease lysobacter enzymogenes 1.80 0.207

| pir | postscript | superposed-coordinates |

Alignment Based On Similarities In Structural Features (COMPARER Alignment) 



 
3proc1  (   6 )    pqlkfamqrdlgIfptqlpqylqTeklartqaaaIerefgaqfagswier
3proc2  (  86 )                      yslkqLqsAmeqLdagan--aldgVqswyvd-
                                       aaaaaaaaaaaaaaaa      bbbbbbb 
 


    
3proc1  (  56 )    nedgsfkLVAATsgark--sStlg--------gVeVrnvr   
3proc2  ( 123 )    -prsn-aVVVkVddgatdaGvdFvalSgAdsaqVriesspgkl
                         bbbbbb                     bbbbb     
 


    
 


Key
solvent inaccessible                    UPPER CASE      X
solvent accesible                       lower case      x
alpha helix                             red             x
beta strand				blue            x
3 - 10 helix				maroon          x
hydrogen bond to main chain amide    	bold            x
hydrogen bond to mainchain carbonyl     underline	x
disulphide bond                         cedilla         ç
positive phi				italic		x


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