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Protein Alignments organised as Structural Superfamilies


Superfamily :     DNA-binding domain of Mlu1-box binding protein MBP1
Class :    Alpha and beta proteins (a+b)
Fold :    DNA-binding domain of Mlu1-box binding protein MBP1
Number of Members :     1
Average Size :     99


Alignment Genome Distribution HMM Interacting Motifs

Protein
Code		 Start
Residue		 Start
Chain		 End
Residue		 End
Chain		 Domain
Size		 Name Source Resolution R-factor
1bm8-- 4 - 102 - 99 transcription factor mbp1 saccharomyces cerevisiae 1.71 0.197

| pir | postscript | superposed-coordinates |

Alignment Based On Similarities In Structural Features (COMPARER Alignment) 



 
1bm8--  (   4 )    qiysarysgvdVyEfihstgsIMKRkkddwVNAtHILkAAnfakakrtri
                    bbbbbb  bbbbbbb    bbbbb     bbaaaaaaa    aaaaaaa
 


    
1bm8--  (  54 )    lekeVlkethekvqggfgkYqGtWVplniAkqlAekfsVydqLkpLFdf
                   aaaa      bbb        bbbb aaaaaaaaaa   aaaaaaaaa 
 


    
 


Key
solvent inaccessible                    UPPER CASE      X
solvent accesible                       lower case      x
alpha helix                             red             x
beta strand				blue            x
3 - 10 helix				maroon          x
hydrogen bond to main chain amide    	bold            x
hydrogen bond to mainchain carbonyl     underline	x
disulphide bond                         cedilla         ç
positive phi				italic		x


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