Home
About pass2
Superfamily list
Align query
Useful tools
Search
Help
Lab page
Protein Alignments organised as Structural Superfamilies


Superfamily :     Allophycocyanin linker chain (domain)
Class :    Alpha and beta proteins (a+b)
Fold :    Allophycocyanin linker chain (domain)
Number of Members :     1
Average Size :     67


Alignment Genome Distribution HMM Interacting Motifs

Protein
Code		 Start
Residue		 Start
Chain		 End
Residue		 End
Chain		 Domain
Size		 Name Source Resolution R-factor
1b33n- 1 N 67 N 67 phycobilisome 7.8 kd linker polypeptide mastigocladus laminosus 2.30 0.211

| pir | postscript | superposed-coordinates |

Alignment Based On Similarities In Structural Features (COMPARER Alignment) 



 
1b33n-  (   1 )    grlfkItAcvpsqtrirtqrelqntyftklvpyenwfreqqrIqkmgGki
                     bbbbbbb            aaaabbbbbbbaaaaaaaaaaaaa   bb
 


    
1b33n-  (  51 )    vkvelatgkqgintgla
                   bbbbb            
 


    
 


Key
solvent inaccessible                    UPPER CASE      X
solvent accesible                       lower case      x
alpha helix                             red             x
beta strand				blue            x
3 - 10 helix				maroon          x
hydrogen bond to main chain amide    	bold            x
hydrogen bond to mainchain carbonyl     underline	x
disulphide bond                         cedilla         ç
positive phi				italic		x


  Enter Search key:




 
Your suggestions and further clarifications are most welcome.

-contact mini@ncbs.res.in