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Protein Alignments organised as Structural Superfamilies


Superfamily :     Fe-only hydrogenase
Class :    Alpha and beta proteins (a/b)
Fold :    Fe-only hydrogenase
Number of Members :     1
Average Size :     321


Alignment Genome Distribution HMM Interacting Motifs

Protein
Code		 Start
Residue		 Start
Chain		 End
Residue		 End
Chain		 Domain
Size		 Name Source Resolution R-factor
1hfel1 87 L 397 L 321 fe-only hydrogenase (larger subunit) desulfovibrio desulfuricans 1.6 0.158

| pir | postscript | superposed-coordinates |

Alignment Based On Similarities In Structural Features (COMPARER Alignment) 



 
1hfel1  (  87 )    wvpeVekklkdgkvkCIAMPapAVRyaLGdafgmpvgsvTtgkMLaALqk
                    aaaaaaaaa    bbbbbb 33333 33333        aaaaaaaaaa
 


    
1hfel1  ( 137 )    LgFahcWDTEfTAdvTiweEGseFveRLtkksdmplPQFTsccPgWqkyA
                   a   bb  aaaaaaaaaaaaaaaaaaaa         bb    aaaaaaa
 


    
1hfel1  ( 187 )    etyypeLlphfStckSpIGmNGalAKtyGAermkydpkqVyTVSIMPcia
                   aaa 333333      aaaaaaaaa  aaaaaa   333bbbbbbb   a
 


    
1hfel1  ( 237 )    kkyEGlrpelksSgmrDIdATLTTreLayMIkkagidFakLpdgkrdslM
                   aaaaa              bbbbaaaaaaaaaa    333          
 


    
1hfel1  ( 287 )    GeStggAtiFGvTGGVMEAALrfayeavtgkkPdswdfkaVrgldgiKea
                       aaaa333   aaaaaaaaaaaaaaa         333     bbbb
 


    
1hfel1  ( 337 )    tvnVggtdVkVAVVHgakrFkqVCddVkagkSpyhFIEYMacpgGcvcGg
                   bbbb  bbbbbbbbb 333aaaaaaaaa       bbbbb     333  
 


    
1hfel1  ( 387 )    GQpvmpgvleam
                               
 


    
 


Key
solvent inaccessible                    UPPER CASE      X
solvent accesible                       lower case      x
alpha helix                             red             x
beta strand				blue            x
3 - 10 helix				maroon          x
hydrogen bond to main chain amide    	bold            x
hydrogen bond to mainchain carbonyl     underline	x
disulphide bond                         cedilla         ç
positive phi				italic		x


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