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Protein Alignments organised as Structural Superfamilies |
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| Alignment | Matrices | Tree | Genome Distribution | HMM | Interacting Motifs | Structural Motifs |
| Protein Code |
Start Residue |
Start Chain |
End Residue |
End Chain |
Domain Size |
Name | Source | Resolution | R-factor |
|---|---|---|---|---|---|---|---|---|---|
| 1a3c-- | 3 | - | 180 | - | 166 | pyrimidine operon regulatory protein pyrr | bacillus subtilis | 1.6 | 0.192 |
| 1bd3a- | 21 | A | 244 | A | 224 | uracil phosphoribosyltransferase | toxoplasma gondii | 1.93 | 0.186 |
| 1bzya- | 4 | A | 217 | A | 214 | hypoxanthine-guanine phosphoribosyltransferas | homo sapiens | 2.0 | 0.190 |
| 1dkra1 | 8 | A | 166 | A | 157 | phosphoribosyl pyrophosphate synthetase | bacillus subtilis | 2.30 | 0.180 |
| 1dkra2 | 167 | A | 316 | A | 141 | phosphoribosyl pyrophosphate synthetase | bacillus subtilis | 2.30 | 0.180 |
| 1dqna- | 1 | A | 230 | A | 230 | guanine phosphoribosyltransferase | giardia lamblia | 1.75 | 0.204 |
| 1ecfa1 | 250 | A | 492 | A | 243 | glutamine phosphoribosylpyrophosphate | escherichia coli | 2.0 | 0.175 |
| 1fsga- | 0 | A | 230 | A | 233 | hypoxanthine-guanine phosphoribosyltransferas | toxoplasma gondii | 1.05 | 0.122 |
| 1g2qa- | 1 | A | 178 | A | 178 | adenine phosphoribosyltransferase 1 | saccharomyces cerevisiae | 1.50 | 0.199 |
| 1hgxa- | 7 | A | 179 | A | 164 | hypoxanthine-guanine-xanthine | tritrichomonas foetus | 1.9 | 0.175 |
| 1nula- | 3 | A | 152 | A | 142 | xanthine-guanine phosphoribosyltransferase | escherichia coli | 1.8 | 0.192 |
| 1oroa- | 1 | A | 213 | A | 213 | orotate phosphoribosyltransferase | escherichia coli | 2.40 | 0.183 |
| 1qb7a- | 2 | A | 237 | A | 236 | adenine phosphoribosyltransferase | leishmania donovani | 1.50 | 0.200 |
| 1tc1a- | 5 | A | 188 | A | 175 | hypoxanthine phosphoribosyltransferase | trypanosoma cruzi | 1.41 | 0.198 |
| pir | postscript | superposed-coordinates |
Alignment Based On Similarities In Structural Features (COMPARER Alignment)
1a3c-- ( 3 )
1bd3a- ( 21 ) qe-esilqdIitrfpnVvl
1bzya- ( 4 ) spGvvisddepGydl-dlf----------cip
1dkra1 ( 8 )
1dkra2 ( 167 )
1dqna- ( 1 ) miCsvtgkpvkdvlstffkdr
1ecfa1 ( 250 )
1fsga- ( 0A) gshmAskpiedYGkGkgriePmyipdn-tfynA-ddf----------lvp
1g2qa- ( 1 ) mp-iasyaqeLklaLhqyp
1hgxa- ( 7 )
1nula- ( 3 )
1oroa- ( 1 ) mkpyqrqFIefAlskqVLkF
1qb7a- ( 2 ) pfkevspnsflLdd-shaLSqlLkksYrwys
1tc1a- ( 5 )
1a3c-- ( 3 ) qkaviLd------------------eqaIrrALt
1bd3a- ( 39 ) MkqtaqLraMMtiIr-dketp---kee-------------FvfyAdrLIr
1bzya- ( 25 ) -------nhYa--eD-LerVFIp------------------hglImdrTe
1dkra1 ( 8 )
1dkra2 ( 167 )
1dqna- ( 22 ) ndVl-----esevkk--FhLLAT------------------feECkaLAa
1ecfa1 ( 250 ) npcLFeYVyfarpdsfidkIsVysARvnMGt
1fsga- ( 36 ) -------phCk--py-IdkILLp------------------gglVkdrVe
1g2qa- ( 19 ) -------nfps--eg-IlFedFlpIfr-------------npglfqkLId
1hgxa- ( 7 ) m--dd-Lervlyn------------------qddIqkrIr
1nula- ( 3 ) ekyiVtwdmLqihAr
1oroa- ( 21 ) geftLks------grkSPYfFnAglFn-------------tgrDlalLGr
1qb7a- ( 32 ) -------pvfSprnv-prfAdvssIte-------------speTlkaIrd
1tc1a- ( 5 ) y--ef-Aekilft------------------eeeIrtrIk
aaaaaaaaa
1a3c-- ( 19 ) rIAheMiernk----------------------ciLVGIktrGiyLAkrL
1bd3a- ( 72 ) lLIeeAlneLpfqkkevttpldvsyhgvsfyskiCGVSIvraGeSMesgL
1bzya- ( 47 ) rLArdVMkeMgg-------------------hhIvALCVlkgGykFfadL
1dkra1 ( 8 ) nlkIFsL-nSnpelAkei
1dkra2 ( 167 ) diVIVSPdhgGvtrArkl
1dqna- ( 47 ) DTArrMneyYkdva-----------------epVTLVALltgAylYAslL
1ecfa1 ( 281 ) kLGekIarewe------------------dldIdVVIPIpetScdIAleI
1fsga- ( 58 ) kLAydIhrtYfg-------------------eeLhIICIlkgSrgFFnlL
1g2qa- ( 46 ) AFklhLeeafpe------------------vkidyIVGLesrGflFGptL
1hgxa- ( 26 ) eLAaeLtefYed-------------------knPVMICvltgAvfFYtdL
1nula- ( 18 ) kLAsrLm---------------------pseqwkGIIAvsrgGlvPGalL
1oroa- ( 52 ) fYAeALvdsg--------------------iefdLLFGpAykGipiAttT
1qb7a- ( 61 ) fLVqrYrams--------------------paPthILGFdarGflFGpmI
1tc1a- ( 24 ) evAkrIaddYkgk------------gLrpyvnPLVLISVlkGSfmFTadL
aaaaaaaa bbbbb aaaaaaa
1a3c-- ( 51 ) aerieqieg--------npvtvGeIdItl-y--------------rn---
1bd3a- ( 122 ) ravcr-------------gvriGkIlIqr-de-----------------t
1bzya- ( 78 ) ldyIkalnrnsdrsI---pMtvdfIrLks-y---c-------ndqst---
1dkra1 ( 25 ) Adivgv------------qlGkcsvtrfs---------------------
1dkra2 ( 185 ) Adrl--------------kApiAiIdk-----------------------
1dqna- ( 80 ) tvhLt------------FpytlhfVkvssykgt-----------------
1ecfa1 ( 313 ) Arilg------------kpyrqGFvknryvgrtfimpgqqlrrksvr---
1fsga- ( 89 ) idyLatiqkysgressvppffehyVrLkS-y---q-------ndnst---
1g2qa- ( 78 ) Alalg--------------vgfvpVrkag-k---LpgeCfkatyeke---
1hgxa- ( 57 ) lkhLd------------fqlepDyIiCsS-l-------------------
1nula- ( 47 ) areLgir-------------hvdtVcIs----------------------
1oroa- ( 82 ) avALaehhd--------ldlpyCfNrkea-kd---------------hge
1qb7a- ( 91 ) Avele--------------ipfvlMrk----adknagllirSepyekeyk
1tc1a- ( 62 ) craLcdf---------nvpvrmefIcvss---------------------
aaaa bbbbb
1a3c-- ( 83 ) -dePlvkgadI-pv-dItdq-kVILVDdvLy----tGrtVrAGmdaLvdv
1bd3a- ( 141 ) taepkliyekL--padIrer-wVMLLdPmCa----tAGsVCkAIeVLlrl
1bzya- ( 111 ) -gdIkvigg-d-dLstLtgk-nVLIVEdiId----tgktMqtLlslVrqy
1dkra1 ( 42 ) -dgevqInIee----sIrgc-dCyIIQsTsdpvnehimELliMVdaLkra
1dkra2 ( 198 ) -----rmnivg----nIegk-tAiLiddiId----tAgtItlAAnaLven
1dqna- ( 101 ) --rqesVvFdeedlkqLkekreVVLIdeyVd----sGhtIfSIQeqIk--
1ecfa1 ( 348 ) ----rkLnan---raeFrdk-nVLLVddSIv----rGttSeqIIemArea
1fsga- ( 125 ) -gqLtv-ls-d-dlsiFrdk-hVLIVedivd----tgftLteFGerLkav
1g2qa- ( 107 ) -ygsdlfeIqk-naIp-ags-nVIIVdDiIa----tgGsAaAAgeLVeqL
1hgxa- ( 84 ) ----tiskd-L-kt-nIegr-hVLVVediId----tGltMyqLlnnLqmr
1nula- ( 62 ) --slkvlkrAeg------dGegfIVIddlVd----tggtAvaIremYp--
1oroa- ( 108 ) ggnlvgs--------aLq-g-rVMLVddvIt----aGtaIreSmeiIqan
1qb7a- ( 123 ) eaapevMTIry-gSIg-kgs-rVVLIdDvla----tGgtAlSGLqLVeas
1tc1a- ( 82 ) --yvrmlld-T-rh-sIegh-hVLIVediVd----tAltLnyLyhmYftr
bbbb bbbbbb bb aaaaaaaaaaa
1a3c-- ( 125 ) grPs---siqLAVLVdRg---------------hrelpi----------r
1bd3a- ( 184 ) -gVkeer-IIFVNILAAp---------------qGIerVFkeyp----kV
1bzya- ( 153 ) -nPk---mvkVASLLvKrTp-------------rsv-gy----------k
1dkra1 ( 86 ) -sAk---tINIvIpyYgyArqDrks-repitAklFAnlLetagAt-----
1dkra2 ( 243 ) -gAk---eVyAcCthPvLs-------------gpAVerIn------nStI
1dqna- ( 143 ) -------hAkICSCFVkdvdaIk--------khs-----------aLadT
1ecfa1 ( 386 ) -gAk---kVYLASAAPeIrfPNvygidMpsateLiAhgrevdeIrqiIgA
1fsga- ( 166 ) -gPk---SMrIATLVeKrTd-------------rsn-sl----------k
1g2qa- ( 149 ) -eAn---lleYNFVMeldfl-------------kgrskL---------na
1hgxa- ( 122 ) -kPa---sLkVCTLCdkdig-------------kkaydV----------p
1nula- ( 106 ) -------kAhFVTIFAkpaGrplVddyVvdIpq-----------------
1oroa- ( 144 ) -gAt---LaGVLISLdrqergrg--------eiSaiqeVerdy-----nC
1qb7a- ( 166 ) -dAv---VvEMVSILsipfl-------------kAaekIhstansrykdi
1tc1a- ( 131 ) -rPa---sLkTVVLLdkr-e-------------grrvpf----------s
bbbbbbbbb
1a3c-- ( 147 ) AdYiGkn---ipTsk-s--ekVmVq------Ldevd---qnDlVAiy--e
1bd3a- ( 213 ) rMVTAaVDi-cLnsr-y--yIvpGI------gdFgdryfgtm
1bzya- ( 175 ) PdFvGFe---IP--d-k--fVVGYA------ldYneyFrdLnhVCvI--s
1dkra1 ( 128 ) rViAldLhap--qIqgfFdipidhl------------------------m
1dkra2 ( 270 ) keLvVtnsiklpe--------------------------ekkIerfkqls
1dqna- ( 167 ) kMFyGyt--pMpk---gS-wLIGFG------lddnglrrgWahLFDinLs
1ecfa1 ( 432 ) dgLIFQdlnd--Lid-AVr---aenpdiqqFecSVFnGvyvtkdVd----
1fsga- ( 188 ) GDfVGFS---Ie--d-v--wIVGcC------YdFnemFrdFdhVAvL--s
1g2qa- ( 173 ) pvftLL
1hgxa- ( 145 ) idycGfv---Ve--n-r--yIIGYG------fdfhnkyrnlpvIGIl--k
1nula- ( 132 ) -dTwieQPwdmg--------------------------------------
1oroa- ( 177 ) kVisIItLkd--LIa-YL-eek---pemaehlaaVkaYreefGv
1qb7a- ( 199 ) kFIsLLsddaLteeN-c--gdsk----------------nytgprvl--s
1tc1a- ( 153 ) AdyvVAn---Ip--n-A--fVIGYG------LdyddtyrelrdIVVl--r
bbbb
1a3c-- ( 180 ) n
1bd3a- ( )
1bzya- ( 209 ) etGkakyka
1dkra1 ( 152 ) gvpilgeyfegknle
1dkra2 ( 294 ) vgpllaeaiirvhe---qqsvsylfs
1dqna- ( 205 ) esevteFrrrLtehIkglningvnry
1ecfa1 ( 472 ) qgyldfldtlrnddakavqrq
1fsga- ( 222 ) daArkkfek
1g2qa- ( )
1hgxa- ( 179 ) e
1nula- ( 143 ) ----------------vvfvppisgr
1oroa- ( )
1qb7a- ( 228 ) cgdvlaehph
1tc1a- ( 187 ) pe
Key
solvent inaccessible UPPER CASE X
solvent accesible lower case x
alpha helix red x
beta strand blue x
3 - 10 helix maroon x
hydrogen bond to main chain amide bold x
hydrogen bond to mainchain carbonyl underline x
disulphide bond cedilla ç
positive phi italic x