Home
About pass2
Superfamily list
Align query
Useful tools
Search
Help
Lab page
Protein Alignments organised as Structural Superfamilies


Superfamily :     N-terminal domain of the delta subunit of the F1F0-ATP synthase
Class :    All alpha proteins
Fold :    N-terminal domain of the delta subunit of the F1F0-ATP synthase
Number of Members :     1
Average Size :     105


Alignment Genome Distribution HMM Interacting Motifs

Protein
Code		 Start
Residue		 Start
Chain		 End
Residue		 End
Chain		 Domain
Size		 Name Source Resolution R-factor
1abv-- 1 - 105 - 105 delta subunit of the f1f0-atp synthase escherichia coli --- ---

| pir | postscript | superposed-coordinates |

Alignment Based On Similarities In Structural Features (COMPARER Alignment) 



 
1abv--  (   1 )    sefitvArpyAkaafdfAvehqsverWqdmLafAAevTkneqMaelLsga
                      aaaaaaaaaaaaaaaaa   aaaaaaaaaaaaaaa  aaaaaaa   
 


    
1abv--  (  51 )    lapetlAesFiavCgeqLdengqnlIrvMAengrLnALpdVleqFihlra
                     aaaaaaaaaaaa     aaaaaaaaaaaa   333aaaaaaaaaaaaa
 


    
1abv--  ( 101 )    vseat
                   aaaa 
 


    
 


Key
solvent inaccessible                    UPPER CASE      X
solvent accesible                       lower case      x
alpha helix                             red             x
beta strand				blue            x
3 - 10 helix				maroon          x
hydrogen bond to main chain amide    	bold            x
hydrogen bond to mainchain carbonyl     underline	x
disulphide bond                         cedilla         ç
positive phi				italic		x


  Enter Search key:




 
Your suggestions and further clarifications are most welcome.

-contact mini@ncbs.res.in