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Protein Alignments organised as Structural Superfamilies


Superfamily :     Disulphide-bond formation facilitator (DSBA), insertion domain
Class :    All alpha proteins
Fold :    Disulphide-bond formation facilitator (DSBA), insertion domain
Number of Members :     2
Average Size :     64


Alignment Genome Distribution HMM Interacting Motifs

Protein
Code		 Start
Residue		 Start
Chain		 End
Residue		 End
Chain		 Domain
Size		 Name Source Resolution R-factor
1bed-1 63 - 126 - 64 dsba oxidoreductase vibrio cholerae 2.1 0.205
1fvka1 65 A 128 A 64 disulfide bond formation protein escherichia coli 1.7 0.198

| pir | postscript | superposed-coordinates |

Alignment Based On Similarities In Structural Features (COMPARER Alignment) 



 
1bed-1  (  63 )     gnmgqAmskAyaTMialevedkMvpvmfnrihtlrkpPkdeqeLrqIFl
1fvka1  (  65 )    ggdlgkdltqAwaVAmalgvedkVtvplfegvqktq-tIrsasdIrdvFi
                       aaaaaaaaaaaaa   aaaaaaaaaaaa         aaaaaaaaa
 


    
1bed-1  ( 112 )    degidaakFdaayng
1fvka1  ( 114 )    nagIkgeeYdaawns
                        aaaaaaaa  
 


    
 


Key
solvent inaccessible                    UPPER CASE      X
solvent accesible                       lower case      x
alpha helix                             red             x
beta strand				blue            x
3 - 10 helix				maroon          x
hydrogen bond to main chain amide    	bold            x
hydrogen bond to mainchain carbonyl     underline	x
disulphide bond                         cedilla         ç
positive phi				italic		x


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