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Protein Alignments organised as Structural Superfamilies |
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| Alignment | Matrices | Tree | Genome Distribution | HMM | Interacting Motifs | Structural Motifs |
| Protein Code |
Start Residue |
Start Chain |
End Residue |
End Chain |
Domain Size |
Name | Source | Resolution | R-factor |
|---|---|---|---|---|---|---|---|---|---|
| 1a4pa- | 1 | A | 92 | A | 92 | s100a10 | homo sapiens | 2.25 | 0.227 |
| 1alva- | 94 | A | 266 | A | 173 | calpain | sus scrofa | 1.9 | 0.19 |
| 1auib- | 5 | B | 169 | B | 165 | serine/threonine phosphatase 2b | homo sapiens | 2.1 | 0.187 |
| 1c07a- | 9 | A | 103 | A | 95 | epidermal growth factor receptor pathway | homo sapiens | --- | --- |
| 1c7va- | 87 | A | 154 | A | 68 | calcium vector protein | branchiostoma lanceolatum | --- | --- |
| 1ctda- | 1 | A | 34 | A | 34 | troponin c site iii - site iii homodimer (nmr, 7 structu | synthetic, based on sequence from (gallus gallus) | --- | --- |
| 1dgua- | 1 | A | 183 | A | 183 | calcium-saturated cib | homo sapiens | --- | --- |
| 1e8aa- | 1 | A | 87 | A | 87 | s100a12 | homo sapiens | 1.95 | 0.18 |
| 1eg3a1 | 85 | A | 209 | A | 125 | dystrophin | homo sapiens | 2.00 | 0.194 |
| 1eg3a2 | 210 | A | 306 | A | 97 | dystrophin | homo sapiens | 2.00 | 0.194 |
| 1el4a- | 2 | A | 195 | A | 194 | obelin | obelia longissima | 1.73 | 0.188 |
| 1exra- | 2 | A | 147 | A | 146 | calmodulin | paramecium tetraurelia | 1.00 | 0.122 |
| 1fi6a- | 6 | A | 97 | A | 92 | eh domain protein reps1 | mus musculus | --- | --- |
| 1fpwa- | 1 | A | 190 | A | 190 | calcium-binding protein ncs-1 | saccharomyces cerevisiae | --- | --- |
| 1ggwa- | 2 | A | 141 | A | 140 | cdc4p | schizosaccharomyces pombe | --- | --- |
| 1h8ba- | 1 | A | 73 | A | 73 | titin | oryctolagus cuniculus | --- | --- |
| 1hqva- | 8 | A | 188 | A | 178 | programmed cell death protein 6 | mus musculus | 2.30 | 0.250 |
| 1ig5a- | 1 | A | 75 | A | 75 | vitamin d-dependent calcium-binding protein, | bos taurus | 1.50 | 0.196 |
| 1j7qa- | 1 | A | 86 | A | 86 | calcium vector protein | branchiostoma lanceolatum | --- | --- |
| 1jbaa- | 2 | A | 190 | A | 189 | guanylate cyclase activating protein 2 | bos taurus | --- | --- |
| 1jfja- | 1 | A | 134 | A | 134 | calcium-binding protein | entamoeba histolytica | --- | --- |
| 1k94a- | 53 | A | 217 | A | 165 | grancalcin | homo sapiens | 1.70 | 0.203 |
| 1mho-- | 1 | - | 88 | - | 88 | s-100 protein | bos taurus | 2.0 | 0.195 |
| 1mr8a- | 1 | A | 90 | A | 90 | migration inhibitory factor-related protein 8 | homo sapiens | 1.90 | 0.193 |
| 1psra- | 1 | A | 100 | A | 100 | psoriasin | homo sapiens | 1.05 | 0.1038 |
| 1qasa1 | 205 | A | 298 | A | 94 | phospholipase c delta-1 | rattus norvegicus | 2.4 | 0.212 |
| 1qjta- | 7 | A | 105 | A | 99 | epidermal growth factor receptor substrate | mus musculus | --- | --- |
| 1qlsa- | 5 | A | 99 | A | 95 | annexin i | homo sapiens | 2.3 | 0.214 |
| 1rec-- | 9 | - | 198 | - | 185 | recoverin (calcium sensor in vision) | bovine (bos taurus) recombinant form expressed | 1.9 | 0.214 |
| 1sra-- | 136 | - | 286 | - | 151 | sparc | homo sapiens | 2.0 | 0.214 |
| 1wdcb- | 12 | B | 153 | B | 142 | scallop myosin | aequipecten irradians | 2.0 | 0.194 |
| 2cbla1 | 178 | A | 263 | A | 86 | zap-70 | homo sapiens | 2.1 | 0.173 |
| 2pvba- | 1 | A | 108 | A | 107 | parvalbumin | esox lucius | 0.91 | 0.109 |
| 2sas-- | 1 | - | 185 | - | 185 | sarcoplasmic calcium-binding protein (iso type ii) | amphioxus (branchiostoma lanceolatum) | 2.4 | 0.109 |
| 2scpa- | 1 | A | 174 | A | 174 | sarcoplasmic calcium-binding protein | sandworm (nereis diversicolor) | 2.0 | 0.109 |
| pir | postscript | superposed-coordinates |
Alignment Based On Similarities In Structural Features (COMPARER Alignment)
1a4pa- ( 1 )
1alva- ( 94 ) eevrqfrrlfaqlAg
1auib- ( 5 )
1c07a- ( 9 )
1c7va- ( 87 )
1e8aa- ( 1 )
1eg3a1 ( 85 )
1eg3a2 ( 210 )
1el4a- ( 2 ) sskyavklktdfdnprWikrHkhmFdflDingngkItLdeIvskasddIC
1exra- ( 2 )
1fi6a- ( 6 )
1ggwa- ( 2 )
1h8ba- ( 1 )
1hqva- ( 8 ) pgpGggpgPaalpdqsflwnv
1ig5a- ( 1 )
1j7qa- ( 1 )
1jfja- ( 1 )
1k94a- ( 53 ) svytyFsa
1mho-- ( 1 )
1mr8a- ( 1 )
1psra- ( 1 )
1qasa1 ( 205 )
1qjta- ( 7 )
1qlsa- ( 5 )
1rec-- ( 9 )
1sra-- ( 136 ) ppÇldselteFplrM
2cbla1 ( 178 )
2pvba- ( 1 )
2sas-- ( 1 ) gLndfqkqKIkfTFdfFLDmnhdgsIqdnDFedMmtrykevnk
2scpa- ( 1 ) sdlWvqKMktYFnrIDfdkdgaItrmDFesMA
1a4pa- ( 1 )
1alva- ( 109 ) ddmeVsateLmniLnkvvtrhpdLkTdgFgidtCrsMVavMdsdttgkLg
1auib- ( 5 ) sypl
1c07a- ( 9 )
1c7va- ( 87 )
1e8aa- ( 1 )
1eg3a1 ( 85 ) hpkMtelyqsladlnnvrfsayrtamklrrLqka
1eg3a2 ( 210 )
1el4a- ( 52 ) akleAtpeqtkrHqvcVeaFfrgCgMeygkeIafpqFldgWkqLAtsELk
1exra- ( 2 )
1fi6a- ( 6 )
1ggwa- ( 2 )
1h8ba- ( 1 )
1hqva- ( 32 ) FqrvDkdrsgvIsdneLqqalsNgtwtpFnpvTVrsIIsmfDrenkaGVn
1ig5a- ( 1 )
1j7qa- ( 1 ) aa
1jfja- ( 1 )
1k94a- ( 61 ) VagqdgeVdaeeLqrCLtqSgingtyspFsleTCriMIaMldrdhtgkMg
1mho-- ( 1 )
1mr8a- ( 1 )
1psra- ( 1 )
1qasa1 ( 205 )
1qjta- ( 7 )
1qlsa- ( 5 )
1rec-- ( 9 ) lskeIl
1sra-- ( 151 ) rdwLKnvLvtlyerDednnlLtekqklrVkkihenekrleagdhpvelLa
2cbla1 ( 178 )
2pvba- ( 1 ) sfagLkdadVaaAlaaCsaadsFkhkeF
2sas-- ( 44 ) gslsdadyksmqasLedEwrdLkgrADinkddvVsweeYlaMWektiatC
2scpa- ( 33 ) erFakeSemkaeHakvLmdsLTgVWdnfltaVaggkgIdettFinsmkem
1a4pa- ( 1 ) psqmehametmmftFhkf---AgdkgyLtkedLrvLMekefpgflen
1alva- ( 159 ) feeFkyLwnnIkkWqaiYkqf--DvdrsGtIgsseLpgAFeaAgfhlneh
1auib- ( 9 ) emcShfdadeikrlgkrFkkl--DldnsgsLsveEfmslpelqqnplvq-
1c07a- ( 9 ) twvVspaekakYdeiFlkT--DkdmdgfVsgleVreiFlkTgLpstll
1c7va- ( 87 ) eeeilraFkvf--dangdgvIdfdefkfimqkvgeePltd
1e8aa- ( 1 ) tkleehlegivniFhqYSvrkghfdtLskgELkqLLtkelantikn
1eg3a1 ( 119 ) LcLdlLslsaAcdAldqhnL----kqndqpMdilqIinCLttIYdrLeqe
1eg3a2 ( 210 ) hledkyrylFkqv---AsstgfCdqrrLgllLhdsIqiPrql
1el4a- ( 102 ) kwarnepTlIrewgdavfdIF--dkdgsgtItldeWkayGkiSgiSpsqe
1exra- ( 2 ) eqlteeqiaefkeafalf--DkdgdgtIttkelGtVmrslgqnPtea
1fi6a- ( 6 ) wkitdeqrqyYvnqFkti--QpdlngfIpgsaAkefftksklpileL
1ggwa- ( 2 ) stddspykqaFslf--DrhgtgrIpktsIgdLlracgqnptl-
1h8ba- ( 1 ) madtdtaeqviasfril---AsdkpyIlaeeLrrelppdqAqycik
1hqva- ( 82 ) fseFtgVwkYitdWqnvfrty--drdnsgmIdkneLkqALsgfgyrlsdq
1ig5a- ( 1 ) kspeelkgiFekyAakegdpnqLskeELklLLqtefpsllkg
1j7qa- ( 3 ) pkaralgpeEkdeCmkIfdif--DrnaeniApvsdTmdMltklgqtytkr
1jfja- ( 1 ) maealFkei--DvngdgaVsyeeVkafvskkraikneq
1k94a- ( 111 ) fnaFkeLwaaLnawkenFmtV--DqdgsgTVehhELrqAIglmgyrlspq
1mho-- ( 1 ) selekavvalidvFhqYSgregdkhkLkksELkeLInnelshflee
1mr8a- ( 1 ) mltelekalnsiidvYhkySlikgnfhaVyrdDLkkLLeteCpqyIrk
1psra- ( 1 ) sntqaersiigmidmFhky---TrrddkIdkpsLltMMkenfpnFlsa
1qasa1 ( 205 ) ykmltqraeidraFeea---AgsaetLsverLvtfLqhqqreeeAg
1qjta- ( 7 ) lsltqlssgnpvyekyyrqV--eagntgrVlAldAaafLkksglpdlil
1qlsa- ( 5 ) pteterciesliaiFqkHAgrdgnntkIsktEFliFMntelaaftqn
1rec-- ( 15 ) eeLqlntkfteeeLsswyqsfl-kecpsgrItrqeFqtiYskffpeAdP-
1sra-- ( 201 ) rdfeknynMYifPVHwqFgqlD-qhpidgyLshtelapLraplIpmehÇT
2cbla1 ( 178 ) tfrItkadAaefWrka---fgektiVpWksFrqaLhevhpIssgl
2pvba- ( 30 ) FakVgLaskslddVkkAFyvI--DqdksgfIeedeLklFLqnFspsaraL
2sas-- ( 94 ) ksvadLPaWCqnRIpflFkgM--DvsgdgiVdleEFqnYÇknfqLqçadv
2scpa- ( 83 ) vknpeaksvVegPLplFfrAV--DtnednnIsrdeYgiFFgMLgldktma
aaaaaaaaaaa aaaaaaaaaa
1a4pa- ( 45 ) qkd--------plavdkiMkdldqcrdgkVgfqsFfsliagltiacndyf
1alva- ( 207 ) --------------lysmiirrySdeggnMdFdnFIsCLVrldAmfrafk
1auib- ( 56 ) ----------------RvIdIfDtdgngeVdfkEfIegvSqfSvkGdkeq
1c07a- ( 55 ) ---------------ahIwsLCDtkdcgkLskdQFALAfhLIsqklikgi
1c7va- ( 125 ) a------------eVeeamkeadedgngvIdipefmdlik
1e8aa- ( 47 ) Ikd--------kavIdeiFqgLDanqdeqVdfqeFisLvaialkaahy
1eg3a1 ( 165 ) hnnlVnvplCvdMClnwLlnvyDtgrtgrIrVlSFktgIislck
1eg3a2 ( 249 ) gevasf--ggsniepsVrsCFqfannkpeIeaalFldWMrlepqSMvwlp
1el4a- ( 150 ) d-------------CeaTFrhCdldnsgdLdvdeMTrqhlgfwYTLdpeA
1exra- ( 47 ) e-------------LqdmInevDadgngtidfpeFlslmarkmkeqdsee
1fi6a- ( 51 ) ---------------shIwelSDfdkdgaLtLdeFcaAfhlvvarkngyd
1ggwa- ( 42 ) ----------------aeIteiestlpaeVdmeqFlqvlnrpngfdmpgD
1h8ba- ( 44 ) ---------------rMpaysgpgsvpgAl---dYaaFSsalygesd
1hqva- ( 130 ) f-------------HdiLirkfDrqgrgqIAfDDFIqGcIvlqrltdifr
1ig5a- ( 43 ) ps-----------tLdelFeeldkngdgeVsfeeFqvLvkkIs
1j7qa- ( 51 ) eT-----------eaImkeArgpkGdkknIGpeeWltlcskwvrqd
1jfja- ( 37 ) l-------------LqlifksiDadgngeIdqneFakFygsiqgqdlsdd
1k94a- ( 159 ) ---------------tlttivkryskngrIfFddYVaCCVklraltdffr
1mho-- ( 47 ) Ike--------qevVdkvMetLdsdgdgeCdfqeFmafvamittache
1mr8a- ( 49 ) k------------gadvWFkeLDintdgaVnfqeFliLvikmgvaahkks
1psra- ( 46 ) Çdkk------gtnyladVFekkDknedkkIdfseFlsLlgdIatdyhkqs
1qasa1 ( 248 ) palA-------lsLIeryEpsetakaqrqMtkdGFlmYllsadGnafsla
1qjta- ( 54 ) ---------------gkIwdlAdtdgkgvLskqeFFvAlrLVaCAqngle
1qlsa- ( 52 ) qkd--------pgvldrmMkklDldsdgqLdfqEFlnLigglaiachdsf
1rec-- ( 63 ) ----------------kaYAqhVfrSfgtLdFkeyViAlHmTsagkTnqK
1sra-- ( 250 ) ---------------trFFetÇdldndkyIaLdeWAgçFgIkqkdidkdl
2cbla1 ( 220 ) e-------------amaLkstIDltcndyIsvfEFDiFTrlfqpwssLlr
2pvba- ( 78 ) td----------aeTkaFladGdkdgdgmIgvdeFaaMIk
2sas-- ( 142 ) ---------------pavynvItdggkvtFdlnrYkeLYyrLLtspaada
2scpa- ( 131 ) ---------------paSFdaIDtnndglLsleeFviAGsdFFmndgdst
aaaaaaa aaaaaaaaaa
1a4pa- ( 87 ) vvh
1alva- ( 243 ) sldkdgtgqiqvniqewlqlt
1auib- ( 90 ) KlrFaFriyDmdkdgyIsngelfqVlkmmvgnnlkdtqLqqiVdktiina
1c07a- ( 90 ) dpphvltpeMip
1c7va- ( )
1e8aa- ( )
1eg3a1 ( )
1eg3a2 ( 297 ) vlh
1el4a- ( 187 ) dgLygn
1exra- ( 84 ) elieafkvfDrdgnglIsaaelrhvmtnlgekltddeVdemIreadidgd
1fi6a- ( 86 ) lpeklpeslmp
1ggwa- ( 76 ) peefvkgfqvfdkdatgmIgVgelryvltslgeklsneeMdellkgvpvk
1h8ba- ( )
1hqva- ( 167 ) ryDtdqdgwiqvsyeqylsmv
1ig5a- ( )
1j7qa- ( )
1jfja- ( 74 ) kiglkvlYklmDvdgdgkLtkeeVtsffkkhgiekvaeqVmkadangdgy
1k94a- ( 194 ) krdhlqqgsanfiyddflqgt
1mho-- ( )
1mr8a- ( 87 ) hee
1psra- ( 90 ) hgaapÇsg
1qasa1 ( 291 ) hrrvyq
1qjta- ( 89 ) vslsslslavpp
1qlsa- ( 94 ) iks
1rec-- ( 102 ) lewAfsLYDvdgngtIskneVleIVtAifkMIspedtkhlpedEntpekr
1sra-- ( 285 ) v
2cbla1 ( 257 ) nWnsla
2pvba- ( )
2sas-- ( 177 ) GntLm
2scpa- ( 166 ) nkvFW
1a4pa- ( )
1alva- ( )
1auib- ( 140 ) dkdgdgrIsfeefcavvggldihkkmvv
1c07a- ( )
1c7va- ( )
1e8aa- ( )
1eg3a1 ( )
1eg3a2 ( )
1el4a- ( )
1exra- ( 134 ) ghinyeEfvrmmv
1fi6a- ( )
1ggwa- ( 126 ) dGmvnyhdfvqmila
1h8ba- ( )
1hqva- ( )
1ig5a- ( )
1j7qa- ( )
1jfja- ( 124 ) Itleeflefs
1k94a- ( )
1mho-- ( )
1mr8a- ( )
1psra- ( )
1qasa1 ( )
1qjta- ( )
1qlsa- ( )
1rec-- ( 152 ) AekIWgfFgkkdddkLtekeFiegTlankeIlrLIqFEPqkvkek
1sra-- ( )
2cbla1 ( )
2pvba- ( )
2sas-- ( )
2scpa- ( )
Key
solvent inaccessible UPPER CASE X
solvent accesible lower case x
alpha helix red x
beta strand blue x
3 - 10 helix maroon x
hydrogen bond to main chain amide bold x
hydrogen bond to mainchain carbonyl underline x
disulphide bond cedilla ç
positive phi italic x