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Protein Alignments organised as Structural Superfamilies |
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1dkra1
- ATM ==> atomic coordinates by STRIPPER
- SEQ ==> amino acid sequences by ATM2SEQ
- SST ==> secondary structure by SSTRUC
- PSA ==> solvent accessibility by PSA
- HBD ==> hydrogen bonds by HBOND
- 1dkr in RCSB ==> [Research Collaboratory for Structural Bioinformatics-PDB]
- 1dkr in EBI ==> [European Bioinformatics Institute]
- 1dkr in SCOP ==> [Structural Classification of Proteins]
- 1dkr in HOMSTRAD ==> [Homologous Structure Alignment Database]
- 1dkr in DDBASE ==> [Dial-Derived Domain Database]
- 1dkr in CATH ==> [Class Architecture Topology and Homologous superfamily]
- 1dkr in FSSP ==> [Fold Classification based on Structure-Structure alignment of Protiens]
- 1dkr in DSDBASE ==> [Disulphide Database]
- 1dkr in PALI ==> [Phylogeny and ALIgnment of homologous protein structures]
- 1dkr in PRESAGE ==> [Collaborative Resource for Structural Genomics]
- 1dkr in MODBASE ==> [A Database of Annotated Comparative Protein Structure Models]
- 1dkr in 3Dee ==> [A Database of Protein Domain Definitions]
- 1dkr in PQS ==> [Protein Quaternary Structure Query Form at the EBI]
- 1dkr in STING ==> [WWW tool for the simultaneous display of information about macromolecule structure and sequence]
- 1dkr in GRASS ==> [Graphical Representation and Analysis of Structure Server]
- 1dkr in LPC/CSU ==> [Ligand-Protein Contacts & Contacts of Structural]
- 1dkr in LPFC ==> [A Library of Protein Family Cores]
- 1dkr in MMDB ==> [Molecular Modelling DataBase,NCBI]
- 1dkr in GeneCensus ==> [GeneCensus Genome Comparisons]
- 1dkr in SYSTERS ==> [Classification of sequences from SWISS-PROT and PIR into disjoint family clusters and hierarchically into superfamily and subfamily clusters]
- 1dkr in CE ==> [Databases and Tools for 3-D Protein Structure Comparison and Alignment]
- 1dkr in PROMOTIF ==> [PROMOTIF V1.0 - for analysing protein structural motifs]
- 1dkr in PROCHECK ==> [Checks the stereochemical quality of a protein structure, producing a number of PostScript plots analysing its overall and residue-by-residue geometry]
- 1dkr in WHATCHECK ==> [WHAT_CHECK: free WHAT IF verification subset]
- 1dkr in PDBSUM ==> [Summaries and structural analyses of PDB data files]
- 1dkr in Pfam ==> [Protein families database of alignments and HMMs]