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Protein Alignments organised as Structural Superfamilies

Interacting Motifs:



Interacting motif for 1e53a-


Motif
Rank
Interacting
Motif
Residue No in PDBPosition No in alignmentNo of Motifs
interact
Prosite Motifs
Start END Start END
1
FCVDC
36737145494CavCqnvFcvdcdvfvHdslH
2
FCYGC
34434820244-----
3
CAVCQ
36036438424CavCqnvFcvdcdvfvHdslH
4
FQEIP
3313357114-----
5
CCPGC
38138559634-----


Interacting motif for 1faq--


Motif
Rank
Interacting
Motif
Residue No in PDBPosition No in alignmentNo of Motifs
interact
Prosite Motifs
Start END Start END
1
FHEHC
17217645494HnFarktflklafCdiCqkfLlngfrCqtCgykfHehCstkvpt
2
RCQTC
16416837414HnFarktflklafCdiCqkfLlngfrCqtCgykfHehCstkvpt
3
HNFAR
139143594HnFarktflklafCdiCqkfLlngfrCqtCgykfHehCstkvpt
4
FCDIC
15115520244HnFarktflklafCdiCqkfLlngfrCqtCgykfHehCstkvpt
5
VPTMC
18018453584HnFarktflklafCdiCqkfLlngfrCqtCgykfHehCstkvpt


Interacting motif for 1kbea-


Motif
Rank
Interacting
Motif
Residue No in PDBPosition No in alignmentNo of Motifs
interact
Prosite Motifs
Start END Start END
1
CKHCR
35936338424HrFstkswlsqvCnvCqksMifgvkCkhCrlkcHnkCtkeapa
2
CHNKC
36637045494HrFstkswlsqvCnvCqksMifgvkCkhCrlkcHnkCtkeapa
3
XTHRF
333336474HrFstkswlsqvCnvCqksMifgvkCkhCrlkcHnkCtkeapa
4
EAPAC
37337752574HrFstkswlsqvCnvCqksMifgvkCkhCrlkcHnkCtkeapa
5
CNVCQ
34635021254HrFstkswlsqvCnvCqksMifgvkCkhCrlkcHnkCtkeapa


Interacting motif for 1ptq--


Motif
Rank
Interacting
Motif
Residue No in PDBPosition No in alignmentNo of Motifs
interact
Prosite Motifs
Start END Start END
1
HHKCR
26927346504HrFkvynymsptfCdhCgslLwglvkqglkCedCgmnvHhkCrekvan
2
FCDHC
24324720244HrFkvynymsptfCdhCgslLwglvkqglkCedCgmnvHhkCrekvan
3
KCEDC
26026437414HrFkvynymsptfCdhCgslLwglvkqglkCedCgmnvHhkCrekvan
4
KVANL
27527952574HrFkvynymsptfCdhCgslLwglvkqglkCedCgmnvHhkCrekvan
5
LLWGX
25025327304HrFkvynymsptfCdhCgslLwglvkqglkCedCgmnvHhkCrekvan


Common Interacting Motifs:

Protein Code Motif1 Motif2 Motif3 Motif4 Motif5
1e53a-
FCYGC
CAVCQ
FCVDC
FQEIP
-----
1faq--
FCDIC
RCQTC
FHEHC
HNFAR
VPTMC
1kbea-
CNVCQ
CKHCR
CHNKC
XTHRF
EAPAC
1ptq--
FCDHC
KCEDC
HHKCR
-----
KVANL