PASS2-imot

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Protein Alignments organised as Structural Superfamilies

Interacting Motifs:

Interacting motif for 1doza-
Motif
Rank Interacting
Motif Residue No in PDB Position No in alignment No of Motifs
interact Prosite Motifs
Start END Start END
1
NDYEC
269
273
299
306
15
-----
2
YYRPE
284
288
319
323
15
-----
3
LKDRY
43
47
55
59
15
-----
4
PDVQD
233
237
263
267
15
-----
5
YWVDR
156
160
185
189
15
-----
6
RDLFE
240
244
270
274
15
-----
7
RYYTH
24
28
23
27
15
-----
8
FVADH
258
262
288
292
15
-----
9
PEFID
294
298
329
333
15
-----
10
TDDIG
277
281
311
315
13
-----
11
EMHKD
99
103
125
129
15
-----
12
HIEPF
88
92
101
118
14
-----
13
RKKMG
3
7
2
6
14
-----
14
HSLPE
183
187
212
216
14
LIvSaHSLPekikEfGDpY
15
PEPEM
35
39
37
51
13
-----
16
IQDEI
74
78
86
91
12
-----

Motif Rank	Interacting Motif	Residue No in PDB	Position No in alignment	No of Motifs interact	Prosite Motifs
Start	END	Start	END
1	NDYEC	269	273	299	306	15	-----
2	YYRPE	284	288	319	323	15	-----
3	LKDRY	43	47	55	59	15	-----
4	PDVQD	233	237	263	267	15	-----
5	YWVDR	156	160	185	189	15	-----
6	RDLFE	240	244	270	274	15	-----
7	RYYTH	24	28	23	27	15	-----
8	FVADH	258	262	288	292	15	-----
9	PEFID	294	298	329	333	15	-----
10	TDDIG	277	281	311	315	13	-----
11	EMHKD	99	103	125	129	15	-----
12	HIEPF	88	92	101	118	14	-----
13	RKKMG	3	7	2	6	14	-----
14	HSLPE	183	187	212	216	14	LIvSaHSLPekikEfGDpY
15	PEPEM	35	39	37	51	13	-----
16	IQDEI	74	78	86	91	12	-----

Interacting motif for 1hrka-
Motif
Rank Interacting
Motif Residue No in PDB Position No in alignment No of Motifs
interact Prosite Motifs
Start END Start END
1
EMERD
176
180
125
129
15
-----
2
FLDRD
93
97
29
33
15
-----
3
FRYVH
163
167
99
105
15
-----
4
DVHDF
84
88
20
24
15
-----
5
FTSDH
337
341
288
292
15
-----
6
IYRYY
206
210
155
159
14
-----
7
QYRRI
122
126
58
62
14
-----
8
YELDI
346
350
297
301
14
-----
9
PHKYY
156
160
92
96
14
-----
10
PVCRE
409
413
363
367
14
-----
11
DPYPQ
274
278
223
227
15
ILfSaHSLPmsvvNrGDpY
12
PIKIW
131
135
67
71
15
-----
13
PQYSC
192
196
141
145
14
-----
14
CERGR
323
327
273
278
14
-----
15
PTMKW
217
221
166
170
11
-----
16
KECGV
358
362
312
316
10
-----

Motif Rank	Interacting Motif	Residue No in PDB	Position No in alignment	No of Motifs interact	Prosite Motifs
Start	END	Start	END
1	EMERD	176	180	125	129	15	-----
2	FLDRD	93	97	29	33	15	-----
3	FRYVH	163	167	99	105	15	-----
4	DVHDF	84	88	20	24	15	-----
5	FTSDH	337	341	288	292	15	-----
6	IYRYY	206	210	155	159	14	-----
7	QYRRI	122	126	58	62	14	-----
8	YELDI	346	350	297	301	14	-----
9	PHKYY	156	160	92	96	14	-----
10	PVCRE	409	413	363	367	14	-----
11	DPYPQ	274	278	223	227	15	ILfSaHSLPmsvvNrGDpY
12	PIKIW	131	135	67	71	15	-----
13	PQYSC	192	196	141	145	14	-----
14	CERGR	323	327	273	278	14	-----
15	PTMKW	217	221	166	170	11	-----
16	KECGV	358	362	312	316	10	-----

Interacting motif for 1qgoa-
Motif
Rank Interacting
Motif Residue No in PDB Position No in alignment No of Motifs
interact Prosite Motifs
Start END Start END
1
DEYEK
88
92
146
150
15
-----
2
CERDL
25
29
75
79
15
-----
3
CPDRD
33
37
83
94
15
-----
4
YHDTC
14
18
16
59
15
-----
5
HNDYV
117
121
180
184
15
-----
6
CLDHM
157
161
231
235
15
-----
7
RDGID
54
58
111
115
15
-----
8
WKMRF
220
224
307
311
14
-----
9
DSLRD
185
189
270
274
14
-----
10
YPEVD
177
181
262
266
13
-----
11
AHLHQ
250
254
337
341
15
-----
12
RFPAR
166
170
243
247
14
-----
13
SHHAF
148
152
215
226
15
-----
14
LHIIN
82
86
139
143
15
-----
15
FRAFT
39
43
96
100
13
-----
16
QGYQD
72
76
129
133
12
-----

Motif Rank	Interacting Motif	Residue No in PDB	Position No in alignment	No of Motifs interact	Prosite Motifs
Start	END	Start	END
1	DEYEK	88	92	146	150	15	-----
2	CERDL	25	29	75	79	15	-----
3	CPDRD	33	37	83	94	15	-----
4	YHDTC	14	18	16	59	15	-----
5	HNDYV	117	121	180	184	15	-----
6	CLDHM	157	161	231	235	15	-----
7	RDGID	54	58	111	115	15	-----
8	WKMRF	220	224	307	311	14	-----
9	DSLRD	185	189	270	274	14	-----
10	YPEVD	177	181	262	266	13	-----
11	AHLHQ	250	254	337	341	15	-----
12	RFPAR	166	170	243	247	14	-----
13	SHHAF	148	152	215	226	15	-----
14	LHIIN	82	86	139	143	15	-----
15	FRAFT	39	43	96	100	13	-----
16	QGYQD	72	76	129	133	12	-----

Common Interacting Motifs:
Protein Code Motif1 Motif2 Motif3 Motif4 Motif5 Motif6 Motif7 Motif8 Motif9 Motif10 Motif11 Motif12 Motif13
1doza-
RYYTH
EMHKD
RDLFE
LKDRY
IQDEI
-----
HIEPF
-----
HSLPE
PDVQD
FVADH
NDYEC
TDDIG
1hrka-
DVHDF
EMERD
CERGR
QYRRI
-----
PHKYY
FRYVH
PQYSC
-----
-----
FTSDH
YELDI
-----
1qgoa-
YHDTC
QGYQD
DSLRD
-----
CPDRD
FRAFT
-----
LHIIN
SHHAF
YPEVD
-----
-----
WKMRF