 Home
About pass2
Superfamily list
Align query
Useful tools
Search
Help
Lab page
|
Protein Alignments organised as Structural Superfamilies |
|
Genome Distribution Alignment with Sequential Homologues in different GenomesFirst 10 hits are displayed in JOY alignment.You can download all hits.
1jw2a- ( 1 ) msekPltktdylmrLrrcqtidtlervieknkyelsdn-elavFysAadh
NP-288 ( 1 ) MTVQDYLLKFRKISSLESLEKLYDHLNYTLTDDQELINMYRAADH
NP-456 ( 1 ) MTVQDYLLKFRKISSLESLEKLFDHLNYTLTDDMDIVNMYRAADH
AAB402 ( 1 ) MSEKPLTKTDYLMRLRRCQTIDTLERVIEKNKYELSDN-ELAVFYSAADH
NP-455 ( 1 ) MSDKPLTKTDYLMRLRRCQTIDTLERVIEKNKYELSDN-ELAVFYSAADH
NP-406 ( 1 ) MTKTDYLMRLRKCTTIDTLERVIEKNKYELSDD-ELELFYSAADH
NP-085 ( 1 ) TKQEWLYQLRRCSSVNTLEKIIHKNRDSLSNS-ERESFNSAADH
T42104 ( 1 ) TKQEWLYQLRRCSSVNTLEKIIHKNRDSLSTS-ERESFNSAADH
CAA741 ( 1 ) TKQEWLYQLRRCSSANTLEKIIRKNRDSLLNS-ERESFNSAADH
NP-065 ( 1 ) TKQDWLFQLRRCSTLDTLEKIIEKNQNCLPPS-ELESFNAAADH
AAL084 ( 1 ) KVNSHTRYKLTLA-ELEAFNSAVDN
aaaaaaaaa aaaaaaaaaaaaaa aa aaaaaaaaaaa
1jw2a- ( 50 ) rlAEltm-nklyd--kIpssvwkfir
NP-288 ( 50 ) RRAELVSGGRLFDLGQVPKSVWHYVQ
NP-456 ( 50 ) RRAELVSGGRLFDVGQVPQSVWRYVQ
AAB402 ( 50 ) RLAELTM-NKLYD--KIPSSVWKFIR
NP-455 ( 50 ) RLAELTM-NKLYD--KIPSSVWKFIR
NP-406 ( 50 ) RLAELTM-NKLYD--KIPPTVWQHVK
NP-085 ( 50 ) RLAELIT-GKLYD--RIPKEIWKYVR
T42104 ( 50 ) RLAELIT-GKLYD--RIPKEIWKYVR
CAA741 ( 50 ) RLAELIT-GKLYD--RIPKEIWKYVR
NP-065 ( 50 ) RLAELTM-NKLYD--KVPPSVWKYV
AAL084 ( 50 ) RLAELTM-NKLYD--RAPASVWKYV
aaaaaa aaaaaa
Key
solvent inaccessible UPPER CASE X
solvent accesible lower case x
alpha helix red x
beta strand blue x
3 - 10 helix maroon x
hydrogen bond to main chain amide bold x
hydrogen bond to mainchain carbonyl underline x
disulphide bond cedilla ç
positive phi italic x