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Protein Alignments organised as Structural Superfamilies |
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Genome Distribution Alignment with Sequential Homologues in different GenomesFirst 10 hits are displayed in JOY alignment.You can download all hits.
1hq0a- ( 720 ) siestSksNfqkLsrgnIdVLkgrGSIsStrQraIyPyFeAANAdeqqpl
1HQ0-A ( 720 ) SIESTSKSNFQKLSRGNIDVLKGRGSISSTRQRAIYPYFEAANADEQQPL
1HZG-A ( 720 ) SIESTSKSNFQKLSRGNIDVLKGRGSISSTRQRAIYPYFEAANADEQQPL
AAA851 ( 720 ) SIESTSKSNFQKLSRGNIDVLKGRGSISSTRQRAIYPYFEAANADEQQPL
AAN037 ( 720 ) SIESTSKSNFQKLSRGNIDVLKGRGSISSTRQRAIYPYFEAANADEQQPL
AAN037 ( 720 ) SIESTSKSNFQKLSRGNIDVLKGRGGISSTRQRAIYPYFEAANADEQQPL
A55260 ( 720 ) NIESTSRLNLQKLNRGNIDIFKGRGSISSTRQRAIYPYFESANADEQQPV
AAG454 ( 720 ) NVAEISSINFRRLNSGNINVLKGRGVFSSRRLREIYLRFDAANADELRPG
BAA345 ( 720 )
I40325 ( 720 )
aaaaaaaaaaaaa 3333 bbbbbb
1hq0a- ( 770 ) ffyikkdrFdnhgydqyFydntvgpnGiPtLNTYtGeiPSdssSlGStyW
1HQ0-A ( 770 ) FFYIKKDRFDNHGYDQYFYDNTVGPNGIPTLNTYTGEIPSDSSSLGSTYW
1HZG-A ( 770 ) FFYIKKDRFDNHGYDQYFYDNTVGPNGIPTLNTYTGEIPSDSSSLGSTYW
AAA851 ( 770 ) FFYIKKDRFDNHGYDQYFYDNTVGLNGIPTLNTYTGEIPSDSSSLGSTYW
AAN037 ( 770 ) FFYIKKDRFDNHGYDQYFYDNTVGLNGIPTLNTYTGEIPSDSSSLGSTYW
AAN037 ( 770 ) FFYIKKDRFDNHGYDQYFYDNTVGLNGIPTLNTYTGEIPSDSSSLGSTYW
A55260 ( 770 ) FFYIKKNRFDDFGYDQYFYNSTVGLNGIPTLNTYTGEILSDASSLGSTYW
AAG454 ( 770 ) DVYVKKTKFDSMGYDSHFYNEGIGINGAPTLNTYTGEYVADSSSQGATYW
BAA345 ( 770 )
I40325 ( 770 )
bbbbb 333bb bb bbbbb aa
1hq0a- ( 820 ) kkynLtneTsIIrVsnsarGANGIkIaleeVqegkPVIITSGnLsgcTTI
1HQ0-A ( 820 ) KKYNLTNETSIIRVSNSARGANGIKIALEEVQEGKPVIITSGNLSGCTTI
1HZG-A ( 820 ) KKYNLTNETSIIRVSNSARGANGIKIALEEVQEGKPVIITSGNLSGSTTI
AAA851 ( 820 ) KKYNLTNETSIIRVSNSARGANGIKIALEEVQEGKPVIITSGNLSGCTTI
AAN037 ( 820 ) KKYNLTNETSIIRVSNSARGANGIKIALEEVQEGKPVIITSGNLSGCTTI
AAN037 ( 820 ) KKYNLTNETSIIRVSNSARGANGIKIALEEVQEGKPVIITSGNLSGCTTI
A55260 ( 820 ) KKYNLTNETSIIRVSNSARGANGIKIALEEVQEGKPVIITSGNLSGCTTI
AAG454 ( 820 ) LKYNLTNETSIIKVSNSARGANGIKIALEEIEENKPVVITSGTLTGCTVV
BAA345 ( 820 ) LTDNVRIISIENGDEGAIGVRVRLDTVPVATPLILTGGSLSGCTTM
I40325 ( 820 ) LTDNVRIISIENGDEGAIGVRVRLDTVPVATPLILTGGSLSGCTTM
aa bbbbb bbbbbbbbb333 bbbb bbb
1hq0a- ( 870 ) VArkegyIYKVHTGttkslagf-tsttGVkKAVEVLeLLtkepiprvegi
1HQ0-A ( 870 ) VARKEGYIYKVHTGTTKSLAGF-TSTTGVKKAVEVLELLTKEPIPRVEGI
1HZG-A ( 870 ) VARKEGYIYKVHTGTTKSLAGF-TSTTGVKKAVEVLELLTKEPIPRVEGI
AAA851 ( 870 ) VARKEGYIYKVHTGTTKSLAGF-TSTTGVKKAVEVLELLTKEPIPRVEGI
AAN037 ( 870 ) VARKEGYIYKVHTGTTKSLAGF-TSTTGVKKAVEVLELLTKEPIPRVEGI
AAN037 ( 870 ) VARKEGYIYKVHTGTTKSLAGF-TSTTGVKKAVEVLELLTKEPIPRVEGI
A55260 ( 870 ) VARKGGYLYKVHTGTTIPLAGF-TSTTGVKKAVEVFELLTNNPMPRVEGV
AAG454 ( 870 ) FARKGEYFYAVHTGNSESLIGF-TSTSGVAKAIEVLSSLSELEVPALPDV
BAA345 ( 870 ) VGVKEGYLAFYHTGKSTELGDWATAREGVQALYQAHLAMGYAPI-SIPAP
I40325 ( 870 ) VGVKEGYLAFYHTGKSTELGDWATAREGVQALYQAHLAMGYAPI-SIPAP
bbbb bbbbbbbbb aaaaaaaaaaaaa
1hq0a- ( 919 ) msNdfLVdyLsenFedSLITYsssekkpdsqItiird-----nVsvfpY-
1HQ0-A ( 919 ) MSNDFLVDYLSENFEDSLITYSSSEKKPDSQITIIRD-----NVSVFPY-
1HZG-A ( 919 ) MSNDFLVDYLSENFEDSLITYSSSEKKPDSQITIIRD-----NVSVFPY-
AAA851 ( 919 ) MSNDFLVDYLSENFEDSLITYSSSEKKPDSQITIIRD-----NVSVFPY-
AAN037 ( 919 ) MSNDFLVDYLSENFEDSLITYSSSEKKPDSQIAIIRD-----NVSVFPY-
AAN037 ( 919 ) MSNDFLVDYLSENFEDSLITYSSSEKKPDSQITIIRD-----NVSVFPY-
A55260 ( 919 ) MNNDFLVNYLAESFDESLITYSSSEQKIGSKITISRD-----NVSTFPY-
AAG454 ( 919 ) INNNTLVEYLSDNFDSALISYSSSSLKPNSMINISRE-----NVSTFSY-
BAA345 ( 919 ) MRNDDLVS-IAATYDRAVIAYLGKDVPGGGSTRITRHDAGAGSVVSFDYN
I40325 ( 919 ) MRNDDLVS-IAATYDRAVIAYLGKDVPGGGSTRITR
aaaaaaaaaaa bbbbbbbb 333 bbbbbb
1hq0a- ( 963 ) -fldniPehGFGtSaTVLVrvdgnVvVrSLSESYslnadaseisvlkvfs
1HQ0-A ( 963 ) -FLDNIPEHGFGTSATVLVRVDGNVVVRSLSESYSLNADASEISVLKVFS
1HZG-A ( 963 ) -FLDNIPEHGFGTSATVLVRVDGNVVVRSLSESYSLNADASEISVLKVFS
AAA851 ( 963 ) -FLDNIPEHGFGTSATVLVRVDGNVVVRSLSESYSLNADASEISVLKVFS
AAN037 ( 963 ) -FLDNIPEHGFGTSATVLVRVDGNVVVRSLSESYSLNADVSEISVLKVFS
AAN037 ( 963 ) -FLDNIPEHGFGTSATVLVRVDGNVVVRSLSESYSLNADVSEISVLKVFS
A55260 ( 963 ) -FLDNIPEKGFGTSVTILVRVDGNVIVKSLSESYSLNVENSNISVLHVFS
AAG454 ( 963 ) -YTDDIQLPSFGTSVTILVRTNDNTVVRSLSESYTMNSNSSKMVVFNVLQ
BAA345 ( 963 ) AAVQASAVPRLGQVYVLISNDGQGARRVLLAEDLAWAGSGSALDVLN
I40325 ( 963 )
bb bbbbbbbbbbbb bbbbbbbbbbbbb bbbbbbbb
1hq0a- (1012 ) kkF
1HQ0-A (1012 ) KKF
1HZG-A (1012 ) KKF
AAA851 (1012 ) KKF
AAN037 (1012 ) KKF
AAN037 (1012 ) KKF
A55260 (1012 ) KDF
AAG454 (1012 ) KDF
BAA345 (1012 )
I40325 (1012 )
bb
Key
solvent inaccessible UPPER CASE X
solvent accesible lower case x
alpha helix red x
beta strand blue x
3 - 10 helix maroon x
hydrogen bond to main chain amide bold x
hydrogen bond to mainchain carbonyl underline x
disulphide bond cedilla ç
positive phi italic x