Home About pass2 Superfamily list Align query Useful tools Search Help Lab page		Protein Alignments organised as Structural Superfamilies

Genome Distribution

Alignment with Sequential Homologues in different Genomes

 
1e53a-  ( 328 )       ldaFqeipleeyngerfCygcqge------L-kd--q--hV-yvCav
1faq--  ( 136 )     lttHnfarktfl---klafCdicqkf------L-l------ng-frCqt
1kbea-  ( 330 )    gsvthrfstkswl----sqvCnvcqks------m-i------fg-VkÇkh
1ptq--  ( 231 )        HrFkvynYm---sptfCdhcgsl------L-wglvk--qG-lkCed
151442  ( 231 )        HAF-QEVTFR--KPTFCHSCS-GF-----LW-G--VTKQ-GYRCRD
208241  ( 231 )     AFLHAF-QEVTFR--KPTFCHSCS-GFVSTGPLW-G--VTKQ-GYRCRD
186432  ( 231 )     AFLHAF-QEVTFR--KPTFCHSCN-GFVSTGPLW-G--VTKR-GYRCQD
152132  ( 231 )     AFLHTF-HEVTFR--KPTFRDSCS-GF-----LW-G--VTKQ-GYRCRE
194220  ( 231 )     AFLHTF-HEVTFR--KPTFCDSCS-GF-----LW-G--VTKQ-GYRCRE
175513  ( 231 )     NHGHYF-VKKTFG--KPAYCHHCC-DK-----IW-G--MLTT-GYSCEM
212965  ( 231 )        HTF-GRKTFH--KPTYCHHCS-DL-----LW-G--LIGQ-GYICEV
231721  ( 231 )        HSF-VKKTFH--KPTYCHHCS-DL-----LW-G--LIQQ-GYICEV
188605  ( 231 )     STDHKM-EIYTFD--APTTCRHCS-KF-----LK-G--RIHQ-GYRCKV
682232  ( 231 )     STDHKM-EIYTFD--APTTCRHCS-KF-----LK-G--RIHQ-GYRCKV
                          bbb                                 b bb   
 


    
1e53a-  ( 363 )    cqnvfCvdcdv--------fvhds-------lhc----------cpgci 
1faq--  ( 168 )    CgykFhehCst--------kVp-t-------mCv----------d---w 
1kbea-  ( 362 )    crlkChnkctk--------eap-a-------çr                 
1ptq--  ( 264 )    cgmnVHhkCre--------kVa-n-------lc                 
151442  ( 264 )    CGLCCHRHCRD-------Q-VR-VE-------------------C     
208241  ( 264 )    CGLCCHRHCRD-------Q-VR-VE-------------------CK    
186432  ( 264 )    CGLCCHRHCRD-------Q-VR-VE-------------------CK    
152132  ( 264 )    CGLCCHKHCRD-------Q-VK-VE-------------------CK-KRP
194220  ( 264 )    CGLCCHKHCRD-------Q-VK-VE-------------------CK-KRP
175513  ( 264 )    CNFVCHEKCLR-------TVVS-Y--------------------C----S
212965  ( 264 )    CNFIVHEKCVT-------NIVT-P--------------------C----T
231721  ( 264 )    CNFIIHERCVSSHHWREGNLPS-TSKCAYCKKTCWSSECLTGYRC--EWC
188605  ( 264 )    CQISVHKGCIS-------S-TG-R--------------------CK--QN
682232  ( 264 )    CQISVHKGCIS-------S-TG-R--------------------CK--QN
                      bb                                             
 


    
1e53a-  (     )                         
1faq--  (     )                         
1kbea-  (     )                         
1ptq--  (     )                         
151442  (     )                         
208241  (     )                         
186432  (     )                         
152132  (     )    GAK                  
194220  (     )    GAK                  
175513  (     )    SV                   
212965  (     )    GVAPYLI              
231721  (     )    GMTTHAGCRMYVVTPCLPTEC
188605  (     )    PVSV                 
682232  (     )    PVSV                 
                                        
 


    
 


Key
solvent inaccessible                    UPPER CASE      X
solvent accesible                       lower case      x
alpha helix                             red             x
beta strand				blue            x
3 - 10 helix				maroon          x
hydrogen bond to main chain amide    	bold            x
hydrogen bond to mainchain carbonyl     underline	x
disulphide bond                         cedilla         ç
positive phi				italic		x