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Protein Alignments organised as Structural Superfamilies |
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Genome Distribution Alignment with Sequential Homologues in different GenomesFirst 10 hits are displayed in JOY alignment.You can download all hits.
1bdfa1 ( 2 ) qgsvteflkprlvdieqv--ssthAkVtlepLergfGhtl
1i50c1 ( 3 ) eegpqvkirea---skdnvDFilsnvd----lam
1i50k- ( 1 ) mnapdrf---elfll-gegesklkidpdtkapnAvvItFEked----htl
210394 ( 1 ) VEQ-----------------------
210394 ( 1 ) VEQ-----------------------
230132 ( 1 ) KVENTRVGQ-----------------------
216749 ( 1 ) QEGEFEVLN-KDLHIATINS--EATVTIDIYIGR-GRGYVPAE
231375 ( 1 ) SAYQILN-PELLICNVDS--NSNFDIELTLEK-GRGYLPAE
156105 ( 1 ) VTVHN-PGMHIATLND--KGKLEVELVVER-GRGYVPAV
158280 ( 1 ) VTLHN-PGMRIATLND--KGKIEAELVVER-GRGYVPAV
195517 ( 1 ) VEIHN-PDLHIATLNE--TAKIEIELIVER-GRGYVPAT
156392 ( 1 ) EVLS-QDLLIMEMMD--GAHVEVELHVEF-GRGYVPAE
738810 ( 1 ) SSIEIMN-PDLHIATLNE--DANLVMDLEIQR-GRGYVPAE
bbbbbb aaa
1bdfa1 ( 40 ) GnaLr----aiLl--ssMppVerIaynveaArveqrt-------------
1i50c1 ( 30 ) Anslr----rVMi--aei--AaaIefeydPwnklkhtdywyeqdsakewp
1i50k- ( 43 ) GnlIr----aeLl--n-drkVlfAaykvehpf------------------
210394 ( 43 ) -----------------------------------RT-------------
210394 ( 43 ) -----------------------------------RT-------------
230132 ( 43 ) -----------------------------------VT-------------
216749 ( 43 ) ENRSDGMPIGFIAIDSIYTPIKNVKLTVENTRVG-QK------T------
231375 ( 43 ) ENKPAEQIFGYIPIDAIFTPIKNVKYSVENTRVE-QR------T------
156105 ( 43 ) QNRASGAEIGRIPVDSIYSPVLKVTYKVDATRVE-QR------T------
158280 ( 43 ) QNRALGAEIGRIPVDSIYSPVLKVTYKVDATRVE-QR------T------
195517 ( 43 ) VT-ATGGEIGRIPVDQIYSPVLKVSYKVEATRVE-QR------T------
156392 ( 43 ) SHDRYADLVGVIPVDAIFSPVLRVRYDIQSCRVG-QR------G------
738810 ( 43 ) EKKKDIEVLGTIPVDSIFSPVQKVVFEVSETRVA-QR------S------
aaaaa aaa bbbbb
1bdfa1 ( 197 ) ---------------------dLDkLvIeMeTngtidpeeAIrrAatila
1i50c1 ( 203 ) qsknCeyedppnegdpfdykaqadtFYMnVeSvgsipVdqVvvrGidtlq
1i50k- ( 68 ) ----------------------farFkLrIqTtegydpkdAlknacnsii
210394 ( 68 ) ---------------------NLDKLVIEMETNGTIDPEEAIRRAATILA
210394 ( 68 ) ---------------------DLDKLVIDLETNGTLDPEEAIRRAATILQ
230132 ( 68 ) ---------------------DYDKLNMTVETNGAVTPDDAVALAARILQ
216749 ( 68 ) ---------------------DYEKMILDVETDGSITPDDAISLAGKIIN
231375 ( 68 ) ---------------------DYEKLILEILTDGSIHPEDALKGAANILI
156105 ( 68 ) ---------------------DFDKLILDVETKNSISPRDALASAGKTLV
158280 ( 68 ) ---------------------DFDKLILDVETKSSITPRDALASAGKTLV
195517 ( 68 ) ---------------------DFDKLVIDVETKNSITARDALASAGKTLV
156392 ( 68 ) ---------------------DYDQLSLEVWTDGTVRPEDAIAEAAKIIK
738810 ( 68 ) ---------------------DYEKLTLEVWTDGSVSPDDAVAQAAKILK
bbbbbb aaaaaaaaaaaaa
1bdfa1 ( 226 ) eqleafv
1i50c1 ( 253 ) kkvasillaltqmdq---d
1i50k- ( 96 ) nklgalktnfetewnlqtl
210394 ( 96 ) EQLEAFV
210394 ( 96 ) QQLAAFV
230132 ( 96 ) DQLQLFI
216749 ( 96 ) DHITFF
231375 ( 96 ) KHFMLF
156105 ( 96 ) ELFGL
158280 ( 96 ) ELFGL
195517 ( 96 ) ELFGL
156392 ( 96 ) EHFTVFV
738810 ( 96 ) EHLTVFI
aa
Key
solvent inaccessible UPPER CASE X
solvent accesible lower case x
alpha helix red x
beta strand blue x
3 - 10 helix maroon x
hydrogen bond to main chain amide bold x
hydrogen bond to mainchain carbonyl underline x
disulphide bond cedilla ç
positive phi italic x