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Protein Alignments organised as Structural Superfamilies |
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Genome Distribution Alignment with Sequential Homologues in different GenomesFirst 10 hits are displayed in JOY alignment.You can download all hits.
1ecma- ( 5 )
5csma- ( 1 ) MdftkpetVlnlqnIrdelvrmEdsIIfkFieRshfAtCpSVyeanhpgl
158031 ( 1 )
167659 ( 1 )
148468 ( 1 )
266771 ( 1 )
231201 ( 1 )
156020 ( 1 )
162730 ( 1 )
156407 ( 1 )
156169 ( 1 )
156003 ( 1 )
1ecma- ( 5 )
5csma- ( 51 ) eipnfkgsfLdwaLsnlEiahSrirrfespdeTpFfpdkiqkSflpsiny
158031 ( 51 )
167659 ( 51 )
148468 ( 51 )
266771 ( 51 )
231201 ( 51 )
156020 ( 51 )
162730 ( 51 )
156407 ( 51 )
156169 ( 51 )
156003 ( 51 )
1ecma- ( 5 ) npllalrekisaldekl
5csma- ( 101 ) pqILApyapeVnyNdkIkkvYiekIIplISkrdgddknnfgsVAtrDieC
158031 ( 101 ) NPLLALREKISALDEKL
167659 ( 101 ) NPLLALRDKISALDEEL
148468 ( 101 ) NPLLALRDKISAVDKKL
266771 ( 101 ) NPLLALRDKISAVDKKL
231201 ( 101 )
156020 ( 101 ) DLSEIRQQITQLDRNL
162730 ( 101 ) ELSDIRQQITQIDRSL
156407 ( 101 ) SLDDIRLRLNELDDQL
156169 ( 101 ) NSLLIFRDEINNIDKKI
156003 ( 101 ) QQL-------
aaaaaaaaaaa
1ecma- ( 22 ) lallaerrelavevGkakllsh-----------------rpVrdidrerd
5csma- ( 151 ) LqsLSrrIHFGKFvAEAkFqsdiplYtklIkskdvegImknItnsaveek
158031 ( 151 ) LALLAERRELAVEVGKAKLLSH-----------------RPVRDIDRERD
167659 ( 151 ) LALLAKRRALAIEVGQAKLLSH-----------------RPVRDIDRERA
148468 ( 151 ) LTLLAERRLLAVEVAQAKLATH-----------------RPIRDVERERA
266771 ( 151 ) LTLLAERRLLAVEVAQAKLATH-----------------RPIRDVERERA
231201 ( 151 ) MLER-------------------------------------------
156020 ( 151 ) LKLLSERHRLAFDVARSKEITQ-----------------KPLRDLEREQQ
162730 ( 151 ) LKLLSERHRLAFDVVRSKEISQ-----------------KSLRDVEREQQ
156407 ( 151 ) LNLLSERRKMSIEVAKSKVETA-----------------KPVRDPAREQQ
156169 ( 151 ) VKLLAERKNLVFKIAQSKIENN-----------------QAIRDIEREKK
156003 ( 151 ) LSLSSQRLQLADQVAQSKAQSG-----------------KAVQDSPREEQ
aaaaaaaaa aaaaaaaaaa aaaaaa
1ecma- ( 55 ) llerlitlg--kah-----hldahyItrlfql-iiedsvltqqallqqh
5csma- ( 201 ) ilerLtkkA--evygvdptrIspeyLvkIYkeIVipItkeVEveYLlrrl
158031 ( 201 ) LLERLITLG--KAH-----HLDAHYITRLFQL-IIEDSVLTQQALLQQH
167659 ( 201 ) LLDRLIHLG--KAH-----HLDAHYITRLFQL-IIEDSVLTQQALLQQH
148468 ( 201 ) LLENLIVLG--KAH-----NLDAHYITRLFQL-VIEDSVLTQQALLQKN
266771 ( 201 ) LLENLIVLG--KAH-----NLDAHYITRLFQL-VIEDSVLTQQALLQKN
231201 ( 201 ) ----LMTLG--KKH-----HLDAHYITRLFQL-IIEDSVLTQQTLLQQH
156020 ( 201 ) LLQELIQFAENQNY-----QLEAQYITDIFQR-IIEDSVATQQVYLQK
162730 ( 201 ) LLQELVQFAENENY-----QLEAQYITSIFQK-IIEDSVLTQQVYLQ
156407 ( 201 ) LLVKLIN-AGKEKY-----QLDPQYITKIFHT-IIEDSVLLQQSYLQ
156169 ( 201 ) MLQKLIFLG--KKY-----NLKSEYITQLFQL-IIEESVATQKKLLKK
156003 ( 201 ) QLQMLAGQA--GSH-----GVGAEQVRLLFAA-QIEANKLVQYRLLSR
aaaaaaaaa aa aaaaaaaaaa aaaaaaaaaaaaaa
1ecma- ( )
5csma- ( 255 ) ee
158031 ( 255 )
167659 ( 255 )
148468 ( 255 )
266771 ( 255 )
231201 ( 255 )
156020 ( 255 )
162730 ( 255 )
156407 ( 255 )
156169 ( 255 )
156003 ( 255 )
Key
solvent inaccessible UPPER CASE X
solvent accesible lower case x
alpha helix red x
beta strand blue x
3 - 10 helix maroon x
hydrogen bond to main chain amide bold x
hydrogen bond to mainchain carbonyl underline x
disulphide bond cedilla ç
positive phi italic x