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3DSwap Database - PDB ID : 11BG



1. SEQUENCE:
Uniprot ID : P00669
Sequence from PDB (atm2seq)
>P1;11BG
structureX:11bg:   1 :A: 124 :B:protein:Bos taurus:1.90:18.9
KESAAAKFERQHMDSGNSPSSSSNYCNLMMCCRKMTQGKCKPVNTFVHESLADVKAVCSQKKVTCKNGQT
NCYQSKSTMRITDCRETGSSKYPNCAYKTTQVEKHIIVACGGKPSVPVHFDASV/KESAAAKFERQHMDS
GNSPSSSSNYCNLMMCCRKMTQGKCKPVNTFVHESLADVKAVCSQKKVTCKNGQTNCYQSKSTMRITDCR
ETGSSKYPNCAYKTTQVEKHIIVACGGKPSVPVHFDASV*
Alignment with homologous sequences
Program : PSI-BLAST
E-Value : 0.001
Database : NCBI-NR		Click here for BLAST Results

2. STRUCTURE:

DIAL DefinitionClick here for DIAL Results for Full Structure
Secondary Structure SummaryClick here for SSTRUC Results for Full Structure
PASS211BG
SCOP11BG
CATH11BG



3. FUNCTION:

GO - Molecular FunctionNucleic acid binding
Pancreatic ribonuclease activity
GO - Biological Process --
GO - Cellular Component --
Pfam Pfam ID PF00074



4. STRUCTURE FEATURES :

PDB ID 11BG
No : of Chains 2 (A, B)
No : of Residues/Chain A:124, B:124)
Amino Acid Profile of Full Chain
Residues in Swapped Region (PDB numbering) LYS1-SER15 (15)
Sequence of Swapped Region KESAAAKFERQHMDS
Region of Swapping N-terminal &alpha helix
Amino Acid Profile of Swapped Region
Residues in Hinge Region (PDB numbering) GLY16-SER22 (7)
Sequence of Hinge RegionGNSPSSS
Amino Acid Profile of Hinge Region
Secondary Structure Calculation using SSTRUCClick here for SSTRUC Results for Full Structure
Click here for SSTRUC Results for Swapped Region
Click here for SSTRUC Results for Hinge Region
Hydrogen Bond Calculation using HBOND Click here for HBOND Results for Full Structure
Click here for HBOND Results for Swapped Region
Click here for HBOND Results for Hinge Region
Solvent Accessibility Calculation using PSA Click here for PSA Results for Full Structure
Click here for PSA Results for Swapped Region
Click here for PSA Results for Hinge Region
Interface Details Major Interface : A (118, 116, 117, 119, 33, 35, 44, 45, 46, 47, 120, 51, 54, 29, 48, 49, 50)
Minor Interface : LYS1-SER15 (15)
Hinge Region : GLY16-SER22 (7)
Visualize Interface Details on HERA Plot Click here for Annotated HERA file in PDF format
Visualize [Chains marked in different color]
Visualize [Swapped Region and Hinge Region]



5. DOWNLOAD :

Full PDB/mmol File Full PDB file
Swapped Region in PDB formatSwapped Region PDB file
Hinge Region in PDB formatHinge Region PDB file
Full tem File Full PDB file
Swapped Region tem FileSwapped Region PDB file
Hinge Region tem FileHinge Region PDB file
Pymol Session File [Chains marked in different color]11BG_2_dimer.pse
Pymol Session File [Swapped Region and Hinge Region marked in different color]11BG_2_ds.pse


3DSwap Database Team :
Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
K. Shameer