Home About pass2 Superfamily list Align query Useful tools Search Help Lab page		Protein Alignments organised as Structural Superfamilies

Useful Tools:


        1. Predict closest superfamily of your query structure and superpose   


        2. Predict closest superfamily of your query sequence based on HMMs   


	3. Simple Multiple Sequence Alignment With MALIGN.    


        4. Structure-Based Sequence Alignment With LSQMAN.   

	
        5. Structure-Based Sequence Alignment With JOY.   


	6. PSI-BLAST Search Against PASS2.    


	7. PHI-BLAST Search Against PASS2.    




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Your suggestions and further clarifications are most welcome.

-please send a mail to mini@ncbs.res.in

PASS2 group : Dr.R.Sowdhamini
              Anirban Bhaduri
              Pugalenthi G