Spatial Orientation of Motifs in Superfamily 02.03.040


                   Average distance from CM              Average angle wrt CM Motif 1                      13.40                              23.56 Motif 2                      8.56                              59.75 Motif 3                      7.18                              96.62 Motif 4                      2.74                              146.08 Motif 5                      9.20                              54.48 Motif 6                      18.73                              16.77 Motif 7                      16.52                              32.59

Average Distance between the Motifs

Motif1 0.00 13.69 16.53 14.86 20.93 28.02 27.65 Motif2 13.69 0.00 5.43 10.94 9.81 26.21 19.85 Motif3 16.53 5.43 0.00 8.51 4.98 21.92 14.45 Motif4 14.86 10.94 8.51 0.00 9.49 16.10 14.95 Motif5 20.93 9.81 4.98 9.49 0.00 20.11 11.26 Motif6 28.02 26.21 21.92 16.10 20.11 0.00 14.12 Motif7 27.65 19.85 14.45 14.95 11.26 14.12 0.00

Average Torsion Angle between the Motifs

Motif1 0.00 -26.44 -45.04 169.42 -53.77 -30.04 166.26 Motif2 -26.44 0.00 136.01 27.56 144.85 -90.07 26.68 Motif3 -45.04 136.01 0.00 17.50 81.14 -137.50 49.94 Motif4 169.42 27.56 17.50 0.00 -7.89 -17.47 -37.92 Motif5 -53.77 144.85 81.14 -7.89 0.00 -136.54 62.28 Motif6 -30.04 -90.07 -137.50 -17.47 -136.54 0.00 16.01 Motif7 166.26 26.68 49.94 -37.92 62.28 16.01 0.00

The percentage length of the Motifs wrt Alignment length : 13.23
The depth of the Motif surrounded region : 7.46
The percentage volume of the Motif surrounded region : 13.29

CM - Centre of Mass of the protein
All distances are in Angstrom and all angles are in Degrees